RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PKDCCQ504Y2 493 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 ARHGAP17Q68EM7 881 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 CXCL17Q6UXB2 119 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 SPOCD1Q6ZMY3 1216 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 LIMS2Q7Z4I7 341 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 ANKS1BQ7Z6G8 1248 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 RSPH3Q86UC2 560 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 SESTD1Q86VW0 696 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 SMC1BQ8NDV3 1235 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 UBA3Q8TBC4 463 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 RNF25Q96BH1 459 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-202ENST00000439724 PKNOX2Q96KN3 472 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 FAM204AQ9H8W3 233 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-202ENST00000439724 WHRNQ9P202 907 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 PLAAQ9Y263 795 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 NME7Q9Y5B8 376 aa12.42□□□□□ -0.42
SMAD3-202ENST00000439724 GOLGA6CA6NDK9 693 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 H0YGN5 161 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 ADAMTS4O75173 837 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 LRCH4O75427 683 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 GAS8O95995 478 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 PGK1P00558 417 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 KRT7P08729 469 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 GOLGA6DP0CG33 693 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 PLTPP55058 493 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 SLC25A11Q02978 314 aaKnown RBP12.41□□□□□ -0.42
SMAD3-202ENST00000439724 PRKCZQ05513 592 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 LLGL1Q15334 1064 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 PPP1R7Q15435 360 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 HADHQ16836 314 aaKnown RBP12.41□□□□□ -0.42
SMAD3-202ENST00000439724 SOWAHAQ2M3V2 549 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 SV2CQ496J9 727 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 ATP13A4Q4VNC1 1196 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 TWF2Q6IBS0 349 aaKnown RBP12.41□□□□□ -0.42
SMAD3-202ENST00000439724 GDF6Q6KF10 455 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-202ENST00000439724 DRICH1Q6PGQ1 229 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-202ENST00000439724 MFSD7Q6UXD7 560 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 SERINC5Q86VE9 423 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 ATL2Q8NHH9 583 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 FBXO25Q8TCJ0 367 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 ATG4AQ8WYN0 398 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 ART4Q93070 314 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 HEMGNQ9BXL5 484 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 GOLGA6AQ9NYA3 693 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 KLK14Q9P0G3 267 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 MTRF1LQ9UGC7 380 aaKnown RBP12.41□□□□□ -0.42
SMAD3-202ENST00000439724 EFR3BQ9Y2G0 817 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 R3HDM2Q9Y2K5 976 aaKnown RBP12.41□□□□□ -0.42
SMAD3-202ENST00000439724 NFS1Q9Y697 457 aa12.41□□□□□ -0.42
SMAD3-202ENST00000439724 hCG_1818297A0A087WSY0 165 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 KPNA7A9QM74 516 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 CAPN15O75808 1086 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 TJP3O95049 919 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 CST5P28325 142 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-202ENST00000439724 LRPAP1P30533 357 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 TAF6P49848 677 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 SOX4Q06945 474 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-202ENST00000439724 CACNB2Q08289 660 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-202ENST00000439724 NOGQ13253 232 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 SNX1Q13596 522 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 KCTD19Q17RG1 926 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-202ENST00000439724 TTMPQ5BVD1 217 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 TFDP3Q5H9I0 405 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 PPP1R26Q5T8A7 1209 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-202ENST00000439724 TXNRD3NBQ6F5E7 133 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 ACOT1Q86TX2 421 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 TTC30AQ86WT1 665 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 CRYBG2Q8N1P7 616 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 ARFGAP1Q8N6T3 406 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 ARRDC4Q8NCT1 418 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 OR6B3Q8NGW1 331 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 FAM76AQ8TAV0 307 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 STK32AQ8WU08 396 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 UBLCP1Q8WVY7 318 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-202ENST00000439724 KBTBD7Q8WVZ9 684 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 ARL8AQ96BM9 186 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 SLC4A5Q9BY07 1137 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 SENP6Q9GZR1 1112 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-202ENST00000439724 DNAI2Q9GZS0 605 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 CHST12Q9NRB3 414 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 KLHL11Q9NVR0 708 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 PTPN22Q9Y2R2 807 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 NEU2Q9Y3R4 380 aa12.4□□□□□ -0.42
SMAD3-202ENST00000439724 THSD7BQ9C0I4 1608 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 LRRD1A4D1F6 860 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 E5RJQ4 531 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 PI4K2BG5E9Z4 385 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 DPYSL4O14531 572 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 PTGESO14684 152 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 SPTLC1O15269 473 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 RPS6KA5O75582 802 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 KRT14P02533 472 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 FAM163BP0C2L3 166 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 PCK1P35558 622 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 CDKN2BP42772 138 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 ZNF143P52747 638 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-202ENST00000439724 SNX16P57768 344 aa12.39□□□□□ -0.43
SMAD3-202ENST00000439724 LMNB2Q03252 620 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms