RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TAP1Q03518 808 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 SMARCB1Q12824 385 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 CCDC122Q5T0U0 273 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 DENND1BQ6P3S1 775 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 TOGARAM2Q6ZUX3 1019 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 FAM35AQ86V20 835 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 FUKQ8N0W3 1084 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 TXLNBQ8N3L3 684 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 PCED1BQ96HM7 432 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 TMEM209Q96SK2 561 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 LPIN3Q9BQK8 851 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 MRPL17Q9NRX2 175 aaKnown RBP21.94■■□□□ 1.1
CHD3-204ENST00000439235 NENFQ9UMX5 172 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 C2CD2LO14523 706 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 CFHP08603 1231 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 CCDC175P0C221 793 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 CTSAP10619 480 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 CPB1P15086 417 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 SSTR3P32745 418 aaPredicted RBP21.93■■□□□ 1.1
CHD3-204ENST00000439235 CDH5P33151 784 aaPredicted RBP21.93■■□□□ 1.1
CHD3-204ENST00000439235 PBX2P40425 430 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 NSFP46459 744 aaKnown RBP21.93■■□□□ 1.1
CHD3-204ENST00000439235 SLC8A3P57103 927 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 NOMO3P69849 1222 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 CENPCQ03188 943 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 BST2Q10589 180 aaKnown RBP21.93■■□□□ 1.1
CHD3-204ENST00000439235 SLC39A12Q504Y0 691 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 NAA35Q5VZE5 725 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 PPP2R2DQ66LE6 453 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 SLC8B1Q6J4K2 584 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 CHRDL2Q6WN34 429 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 PALB2Q86YC2 1186 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 SPATA2LQ8IUW3 424 aaPredicted RBP21.93■■□□□ 1.1
CHD3-204ENST00000439235 ANKRD52Q8NB46 1076 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 ACRBPQ8NEB7 543 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 NOX5Q96PH1 765 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 DESI2Q9BSY9 194 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 B3GNT5Q9BYG0 378 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 NKX2-4Q9H2Z4 354 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 PYCARDQ9ULZ3 195 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 ZKSCAN5Q9Y2L8 839 aa21.93■■□□□ 1.1
CHD3-204ENST00000439235 VWA8A3KMH1 1905 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 RTN2O75298 545 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 FAM200BP0CF97 657 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 UNGP13051 313 aaPredicted RBP21.92■■□□□ 1.1
CHD3-204ENST00000439235 MAGEA1P43355 309 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 CCDC142Q17RM4 750 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 ACAD10Q6JQN1 1059 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 MSANTD4Q8NCY6 345 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 C1orf131Q8NDD1 294 aaKnown RBP21.92■■□□□ 1.1
CHD3-204ENST00000439235 FBXO22Q8NEZ5 403 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 SMARCD1Q96GM5 515 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 FUBP3Q96I24 572 aaKnown RBP eCLIP21.92■■□□□ 1.1
CHD3-204ENST00000439235 KRT82Q9NSB4 513 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 MTUS1Q9ULD2 1270 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 COLQQ9Y215 455 aaPredicted RBP21.92■■□□□ 1.1
CHD3-204ENST00000439235 ADGRG1Q9Y653 693 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 CDY1Q9Y6F8 540 aa21.92■■□□□ 1.1
CHD3-204ENST00000439235 TMCO5BA8MYB1 307 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 ZNF263O14978 683 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 OR4Q2P0C623 313 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 DNAJB2P25686 324 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 ARPP19P56211 112 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 SMAD3P84022 425 aaKnown RBP21.91■■□□□ 1.1
CHD3-204ENST00000439235 GPR17Q13304 367 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 PTPN14Q15678 1187 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 PKDCCQ504Y2 493 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 TMC7Q7Z402 723 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 KIAA1328Q86T90 577 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 LRRTM3Q86VH5 581 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 TTC30AQ86WT1 665 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 SPPL3Q8TCT6 385 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 C2orf15Q8WU43 125 aaKnown RBP21.91■■□□□ 1.1
CHD3-204ENST00000439235 POF1BQ8WVV4 589 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 SECISBP2LQ93073 1101 aaKnown RBP21.91■■□□□ 1.1
CHD3-204ENST00000439235 TRIM11Q96F44 468 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 ISCUQ9H1K1 167 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 PRO3102Q9H379 93 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 SLC28A3Q9HAS3 691 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 ALG13Q9NP73 1137 aaKnown RBP21.91■■□□□ 1.1
CHD3-204ENST00000439235 ENTPD7Q9NQZ7 604 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 TMLHEQ9NVH6 421 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 FNIP2Q9P278 1114 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 PCDHB5Q9Y5E4 795 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 PCDHA13Q9Y5I0 950 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 NLRC5Q86WI3 1866 aa21.91■■□□□ 1.1
CHD3-204ENST00000439235 CLDN5O00501 218 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 CCP110O43303 1012 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 AP1G2O75843 785 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 NPR3P17342 541 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 CA8P35219 290 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 GPD2P43304 727 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 VAV2P52735 878 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 SMC1AQ14683 1233 aaKnown RBP21.9■■□□□ 1.1
CHD3-204ENST00000439235 CFAP221Q4G0U5 840 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 PAQR9Q6ZVX9 377 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 UBA3Q8TBC4 463 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 SPPL2BQ8TCT7 592 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 TCF25Q9BQ70 676 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 DUSP16Q9BY84 665 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms