RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 ATXN2Q99700 1313 aaKnown RBP9.35□□□□□ -0.91
SCRN1-208ENST00000438497 ABLIM1O14639 778 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 AP5Z1O43299 807 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 XPOTO43592 962 aaKnown RBP9.35□□□□□ -0.91
SCRN1-208ENST00000438497 USP17L7P0C7H9 530 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 ODC1P11926 461 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 HNRNPLP14866 589 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCRN1-208ENST00000438497 HMGA1P17096 107 aaKnown RBP9.35□□□□□ -0.91
SCRN1-208ENST00000438497 HOXD12P35452 270 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 MATR3P43243 847 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCRN1-208ENST00000438497 FAM160A1Q05DH4 1040 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 ACACAQ13085 2346 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 EML3Q32P44 896 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 MAP7D1Q3KQU3 841 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 L1TD1Q5T7N2 865 aaKnown RBP9.35□□□□□ -0.91
SCRN1-208ENST00000438497 TAS1R3Q7RTX0 852 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 RABEPKQ7Z6M1 372 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 THEM5Q8N1Q8 247 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 TXNDC5Q8NBS9 432 aaKnown RBP9.35□□□□□ -0.91
SCRN1-208ENST00000438497 OR2I1PQ8NGU4 316 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 SPPL2BQ8TCT7 592 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 C2orf15Q8WU43 125 aaKnown RBP9.35□□□□□ -0.91
SCRN1-208ENST00000438497 SLC39A7Q92504 469 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 ZCWPW1Q9H0M4 648 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 TMEM60Q9H2L4 133 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 CAPN10Q9HC96 672 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.35□□□□□ -0.91
SCRN1-208ENST00000438497 CYP46A1Q9Y6A2 500 aa9.35□□□□□ -0.91
SCRN1-208ENST00000438497 PHLPP2Q6ZVD8 1323 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 TTC26A0AVF1 554 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 MYMKA6NI61 221 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 SFI1A8K8P3 1242 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 LACTBL1A8MY62 500 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 TK2O00142 265 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 WNT7AO00755 349 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 CLDN3O15551 220 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 CDC45O75419 566 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 TOM1L1O75674 476 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 KLF8O95600 359 aaPredicted RBP9.34□□□□□ -0.91
SCRN1-208ENST00000438497 CLTAP09496 248 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 CSH1P0DML2 217 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 CSH2P0DML3 217 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 CXCL8P10145 99 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 MUTP22033 750 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 PAX3P23760 479 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 TIE1P35590 1138 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 OPRD1P41143 372 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 GUCY2FP51841 1108 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 RPL6Q02878 288 aaKnown RBP9.34□□□□□ -0.91
SCRN1-208ENST00000438497 ZNF33AQ06730 810 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 CYP4F3Q08477 520 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 SMARCB1Q12824 385 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 STRN3Q13033 797 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 EMC10Q5UCC4 262 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 PEAR1Q5VY43 1037 aaPredicted RBP9.34□□□□□ -0.91
SCRN1-208ENST00000438497 TOGARAM2Q6ZUX3 1019 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 ZNF605Q86T29 641 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 SLCO6A1Q86UG4 719 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 LRRTM3Q86VH5 581 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 METTL23Q86XA0 190 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 EFCAB13Q8IY85 973 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 ALLCQ8N6M5 410 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 OR10T2Q8NGX3 314 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 HMGB4Q8WW32 186 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 WASF1Q92558 559 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 TNFRSF25Q93038 417 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 PNMA5Q96PV4 448 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 UBL7Q96S82 380 aaPredicted RBP9.34□□□□□ -0.91
SCRN1-208ENST00000438497 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 DNAAF2Q9NVR5 837 aaKnown RBP9.34□□□□□ -0.91
SCRN1-208ENST00000438497 KIAA1522Q9P206 1035 aaPredicted RBP9.34□□□□□ -0.91
SCRN1-208ENST00000438497 ANK1P16157 1881 aa9.34□□□□□ -0.91
SCRN1-208ENST00000438497 PTPRBP23467 1997 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 TRABD2BA6NFA1 517 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 CYSRT1A8MQ03 144 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 BTBD18B2RXH4 712 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 SGK1O00141 431 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 PPEF2O14830 753 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 SLC16A4O15374 487 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 ABCB7O75027 752 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 PRPF40AO75400 957 aaKnown RBP9.33□□□□□ -0.92
SCRN1-208ENST00000438497 NFATC1O95644 943 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 CKMP06732 381 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 MCM7P33993 719 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 CCT6AP40227 531 aaKnown RBP9.33□□□□□ -0.92
SCRN1-208ENST00000438497 SLC6A11P48066 632 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 NOLC1Q14978 699 aaKnown RBP eCLIP9.33□□□□□ -0.92
SCRN1-208ENST00000438497 ZNF77Q15935 545 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 ECM1Q16610 540 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 EOGTQ5NDL2 527 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 SLC36A4Q6YBV0 504 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 SCUBE3Q8IX30 993 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 DCP1BQ8IZD4 617 aaKnown RBP9.33□□□□□ -0.92
SCRN1-208ENST00000438497 IL17RCQ8NAC3 791 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 LRRC15Q8TF66 581 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 CRELD1Q96HD1 420 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 SLC22A12Q96S37 553 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 PNKPQ96T60 521 aa9.33□□□□□ -0.92
SCRN1-208ENST00000438497 PI4K2AQ9BTU6 479 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms