RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 CIZ1Q9ULV3 898 aaPredicted RBP15.98■□□□□ 0.15
HDAC8-213ENST00000436675 LIMCH1Q9UPQ0 1083 aa15.98■□□□□ 0.15
HDAC8-213ENST00000436675 PTPRDP23468 1912 aa15.98■□□□□ 0.15
HDAC8-213ENST00000436675 ADAMTS9Q9P2N4 1935 aa15.98■□□□□ 0.15
HDAC8-213ENST00000436675 ITPR1Q14643 2758 aa15.98■□□□□ 0.15
HDAC8-213ENST00000436675 WDFY3Q8IZQ1 3526 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 SRRM3A6NNA2 597 aaPredicted RBP15.97■□□□□ 0.15
HDAC8-213ENST00000436675 TISP43B9A030 160 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 ANKRD63C9JTQ0 380 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 PRPHP41219 470 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 PMS2CLQ68D20 193 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 CD302Q8IX05 232 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 CCDC33Q8N5R6 958 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 OSCP1Q8WVF1 389 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 ZCCHC14Q8WYQ9 949 aaKnown RBP15.97■□□□□ 0.15
HDAC8-213ENST00000436675 GATA6Q92908 595 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 EXOC4Q96A65 974 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 REEP2Q9BRK0 252 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 LLPHQ9BRT6 129 aaKnown RBP15.97■□□□□ 0.15
HDAC8-213ENST00000436675 LINC00597Q9H2U6 94 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 ZHX3Q9H4I2 956 aa15.97■□□□□ 0.15
HDAC8-213ENST00000436675 MYOFQ9NZM1 2061 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 VWA3AA6NCI4 1184 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 LAD1O00515 517 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 TADA3O75528 432 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 FAM13AO94988 1023 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 PIGRP01833 764 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 CKMP06732 381 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 CSH1P0DML2 217 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 CSH2P0DML3 217 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 CEACAM1P13688 526 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 PAX3P23760 479 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 CYP2F1P24903 491 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 MAPK8P45983 427 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 SMARCB1Q12824 385 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 ZNF268Q14587 947 aaPredicted RBP15.96■□□□□ 0.15
HDAC8-213ENST00000436675 ZNF77Q15935 545 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 HYIQ5T013 277 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 ARMCX6Q7L4S7 300 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 GPBP1Q86WP2 473 aa15.96■□□□□ 0.15
HDAC8-213ENST00000436675 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.96■□□□□ 0.15
HDAC8-213ENST00000436675 HELZP42694 1942 aaKnown RBP15.96■□□□□ 0.14
HDAC8-213ENST00000436675 TRAV19A0A0A6YYK7 116 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 KPNA7A9QM74 516 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 HYAL3O43820 417 aaPredicted RBP15.95■□□□□ 0.14
HDAC8-213ENST00000436675 CSRP1P21291 193 aaKnown RBP15.95■□□□□ 0.14
HDAC8-213ENST00000436675 ACAT1P24752 427 aaKnown RBP15.95■□□□□ 0.14
HDAC8-213ENST00000436675 HMGN5P82970 282 aaKnown RBP15.95■□□□□ 0.14
HDAC8-213ENST00000436675 TSPY1Q01534 308 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 FAM160A1Q05DH4 1040 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 CCDC142Q17RM4 750 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 EML3Q32P44 896 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 ZC2HC1CQ53FD0 456 aaPredicted RBP15.95■□□□□ 0.14
HDAC8-213ENST00000436675 ADALQ6DHV7 355 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 MCTP1Q6DN14 999 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 EFCAB13Q8IY85 973 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 ARL14EPQ8N8R7 260 aaPredicted RBP15.95■□□□□ 0.14
HDAC8-213ENST00000436675 SH3RF2Q8TEC5 729 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 USP33Q8TEY7 942 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 RLN3Q8WXF3 142 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 ATP2A3Q93084 1043 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 IKZF4Q9H2S9 585 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 KCND2Q9NZV8 630 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 DERAQ9Y315 318 aa15.95■□□□□ 0.14
HDAC8-213ENST00000436675 MYO18AQ92614 2054 aaKnown RBP15.95■□□□□ 0.14
HDAC8-213ENST00000436675 C2orf78A6NCI8 922 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 TMEM8BA6NDV4 472 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 KRT18P05783 430 aaKnown RBP15.94■□□□□ 0.14
HDAC8-213ENST00000436675 USP17L7P0C7H9 530 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 RING1Q06587 406 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 USP4Q13107 963 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 NR1H3Q13133 447 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 ACAP1Q15027 740 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 SV2CQ496J9 727 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 TMEM119Q4V9L6 283 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 MDGA1Q8NFP4 955 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 LRRC15Q8TF66 581 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 ASB7Q9H672 318 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 LHX6Q9UPM6 363 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 CEP192Q8TEP8 1941 aa15.94■□□□□ 0.14
HDAC8-213ENST00000436675 TNRC6BQ9UPQ9 1833 aaKnown RBP15.94■□□□□ 0.14
HDAC8-213ENST00000436675 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 SPAARA0A1B0GVQ0 90 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 K7EQS6 105 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 MAP3K13O43283 966 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 TRAK2O60296 914 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 HNRNPLP14866 589 aaKnown RBP eCLIP15.93■□□□□ 0.14
HDAC8-213ENST00000436675 RPL10AP62906 217 aaKnown RBP15.93■□□□□ 0.14
HDAC8-213ENST00000436675 NFE2Q16621 373 aaPredicted RBP15.93■□□□□ 0.14
HDAC8-213ENST00000436675 TRIM61Q5EBN2 209 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 C11orf74Q86VG3 221 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 SFTPA1Q8IWL2 248 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 SCN4BQ8IWT1 228 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 TMEFF1Q8IYR6 380 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 PDCL2Q8N4E4 241 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 FRMD1Q8N878 549 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 FAM84AQ96KN4 292 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 TMEM206Q9H813 350 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 PARVGQ9HBI0 331 aa15.93■□□□□ 0.14
HDAC8-213ENST00000436675 UXTQ9UBK9 157 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms