RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 FAM71BQ8TC56 605 aa5.31□□□□□ -1.56
HMGB1P45-201ENST00000435986 ZNF384Q8TF68 577 aa5.31□□□□□ -1.56
HMGB1P45-201ENST00000435986 RUBCNQ92622 972 aa5.31□□□□□ -1.56
HMGB1P45-201ENST00000435986 KCNC2Q96PR1 638 aa5.31□□□□□ -1.56
HMGB1P45-201ENST00000435986 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
HMGB1P45-201ENST00000435986 OBP2BQ9NPH6 170 aa5.31□□□□□ -1.56
HMGB1P45-201ENST00000435986 PPP4R1LQ9P1A2 415 aa5.31□□□□□ -1.56
HMGB1P45-201ENST00000435986 RAPGEFL1Q9UHV5 662 aa5.31□□□□□ -1.56
HMGB1P45-201ENST00000435986 CAPN11Q9UMQ6 739 aa5.31□□□□□ -1.56
HMGB1P45-201ENST00000435986 USP15Q9Y4E8 981 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P45-201ENST00000435986 GAGE12BA1L429 117 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 GAGE12HA6NDE8 117 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 E9PLN8 166 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 SNX2O60749 519 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 PPFIA4O75335 1185 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 ITGA2BP08514 1039 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 PDIA3P30101 505 aaKnown RBP5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 ANXA11P50995 505 aaKnown RBP5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 PTTG1IPP53801 180 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 ARL4CP56559 192 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 RPS7P62081 194 aaKnown RBP5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 FPGSQ05932 587 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 SLFN5Q08AF3 891 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 HLXQ14774 488 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 RALBP1Q15311 655 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 TAF12Q16514 161 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 TBC1D10BQ4KMP7 808 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 CCDC117Q8IWD4 279 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 CACNA2D3Q8IZS8 1091 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 GALNT15Q8N3T1 639 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 SYT8Q8NBV8 401 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 POC1BQ8TC44 478 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 ZSCAN31Q96LW9 406 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 PRPF18Q99633 342 aaKnown RBP5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 VKORC1Q9BQB6 163 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 PTDSS2Q9BVG9 487 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 TMEM120AQ9BXJ8 343 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 TLR10Q9BXR5 811 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 HELLSQ9NRZ9 838 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 GJB4Q9NTQ9 266 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 ETAA1Q9NY74 926 aa5.3□□□□□ -1.56
HMGB1P45-201ENST00000435986 MYADML2A6NDP7 307 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 LGALS16A8MUM7 142 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 F5H697 171 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 H7C4K7 107 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 NPC1O15118 1278 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 KCNQ3O43525 872 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 ZNF623O75123 536 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 NDST3O95803 873 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 DHRS4L1P0CG22 281 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 EGR1P18146 543 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 SERPINF1P36955 418 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 MAPK9P45984 424 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 MTHFSP49914 203 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 LILRA4P59901 499 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 RNASE9P60153 205 aaKnown RBP5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 NSUN2Q08J23 767 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 ADCK5Q3MIX3 580 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 FAM102AQ5T9C2 384 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 TAF2Q6P1X5 1199 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 KLHL17Q6TDP4 642 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 HTR3DQ70Z44 454 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 GDF7Q7Z4P5 450 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 MAPKAPK5Q8IW41 473 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 GLIS1Q8NBF1 620 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 FEZF2Q8TBJ5 459 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 SNX19Q92543 992 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 GRAMD1AQ96CP6 724 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 TBATAQ96M53 351 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 TEPSINQ96N21 525 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 FAM167BQ9BTA0 163 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 PCDHAC1Q9H158 963 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 DEF6Q9H4E7 631 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 CASS4Q9NQ75 786 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 TRPM5Q9NZQ8 1165 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 HERC5Q9UII4 1024 aaKnown RBP5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 KCNE5Q9UJ90 142 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 ZMYND8Q9ULU4 1186 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 TCAF1Q9Y4C2 921 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 CDY1Q9Y6F8 540 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 FPGT-TNNI3KV9GXZ4 949 aa5.29□□□□□ -1.56
HMGB1P45-201ENST00000435986 XDHP47989 1333 aa5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 PRAMEF33A0A0G2JMD5 474 aa5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 RNASET2O00584 256 aaKnown RBP5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 FOXS1O43638 330 aa5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 RRP9O43818 475 aaKnown RBP5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 PRAMEF10O60809 474 aa5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 RPS6KA4O75676 772 aa5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 SCAF4O95104 1147 aaKnown RBP5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 CHRM3P20309 590 aa5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 ACO1P21399 889 aaKnown RBP5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 FGFR4P22455 802 aa5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 GABRB3P28472 473 aa5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 CD6P30203 668 aa5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 PPIFP30405 207 aaKnown RBP5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 ATICP31939 592 aa5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 APOBEC3AP31941 199 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P45-201ENST00000435986 NDUFV1P49821 464 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms