RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 MTMR12Q9C0I1 747 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 SNX9Q9Y5X1 595 aa16.87■□□□□ 0.29
CALD1-208ENST00000435928 EPG5Q9HCE0 2579 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 TPRP12270 2363 aaKnown RBP16.86■□□□□ 0.29
CALD1-208ENST00000435928 FRMD3A2A2Y4 597 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 OTOL1A6NHN0 477 aaPredicted RBP16.86■□□□□ 0.29
CALD1-208ENST00000435928 TRDMT1O14717 391 aaKnown RBP16.86■□□□□ 0.29
CALD1-208ENST00000435928 TADA3O75528 432 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 NOL4O94818 638 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 ARSAP15289 507 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 PCSK1P29120 753 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 HOXC13P31276 330 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 RESTQ13127 1097 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 PDGFRLQ15198 375 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 DDR2Q16832 855 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 FAM173BQ6P4H8 233 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 SPATA2LQ8IUW3 424 aaPredicted RBP16.86■□□□□ 0.29
CALD1-208ENST00000435928 ADGRF2Q8IZF7 708 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 TOP6BLQ8N6T0 577 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 TTC16Q8NEE8 873 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 SPATA18Q8TC71 538 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 CHFRQ96EP1 664 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 PKMYT1Q99640 499 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 FGFBP2Q9BYJ0 223 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 PCIF1Q9H4Z3 704 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 TMEM206Q9H813 350 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 PDE11AQ9HCR9 933 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 TRPC7Q9HCX4 862 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 PANK4Q9NVE7 773 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 GDAP2Q9NXN4 497 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 GTF3C4Q9UKN8 822 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 SLC8A2Q9UPR5 921 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 R3HCC1Q9Y3T6 440 aaKnown RBP16.86■□□□□ 0.29
CALD1-208ENST00000435928 ACACBO00763 2458 aa16.86■□□□□ 0.29
CALD1-208ENST00000435928 RNF40O75150 1001 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 RPP40O75818 363 aaKnown RBP16.85■□□□□ 0.29
CALD1-208ENST00000435928 CKMP06732 381 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 LHX1P48742 406 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 PXNP49023 591 aaPredicted RBP16.85■□□□□ 0.29
CALD1-208ENST00000435928 RBP5P82980 135 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 FAM160A1Q05DH4 1040 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 MTF1Q14872 753 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 CCDC142Q17RM4 750 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 CFAP221Q4G0U5 840 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 OSTM1Q86WC4 334 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 GPD1LQ8N335 351 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 CPA6Q8N4T0 437 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 CXorf38Q8TB03 319 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 RIN3Q8TB24 985 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 GAB3Q8WWW8 586 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 EXOC4Q96A65 974 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 ANKRD36BP1Q96IX9 119 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 MYRFLQ96LU7 910 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 CNTNAP3BQ96NU0 1288 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 CNTNAP3Q9BZ76 1288 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 SIX4Q9UIU6 781 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 SDK1Q7Z5N4 2213 aa16.85■□□□□ 0.29
CALD1-208ENST00000435928 CACNA1BQ00975 2339 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 A0A087X0B3 334 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 TRAV19A0A0A6YYK7 116 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 CCDC163A0A0D9SF12 145 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 PRPF6O94906 941 aaKnown RBP16.84■□□□□ 0.29
CALD1-208ENST00000435928 EGFP01133 1207 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 USP17L7P0C7H9 530 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 CCDC192P0DO97 292 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 SYT1P21579 422 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 DRD1P21728 446 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 MYO1EQ12965 1108 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 PPM1JQ5JR12 505 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 LMBRD2Q68DH5 695 aaPredicted RBP16.84■□□□□ 0.29
CALD1-208ENST00000435928 SCARA3Q6AZY7 606 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 STXBP4Q6ZWJ1 553 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 SCN4BQ8IWT1 228 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 CCDC65Q8IXS2 484 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 FSIP1Q8NA03 581 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 FUBP3Q96I24 572 aaKnown RBP eCLIP16.84■□□□□ 0.29
CALD1-208ENST00000435928 P2RY13Q9BPV8 354 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 PANK2Q9BZ23 570 aa16.84■□□□□ 0.29
CALD1-208ENST00000435928 GABRDO14764 452 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.28
CALD1-208ENST00000435928 HCRTO43612 131 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 GDF9O60383 454 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 IFNAR2P48551 515 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 USP4Q13107 963 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 ZNF77Q15935 545 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 SOWAHAQ2M3V2 549 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 FBXO43Q4G163 708 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 AASDHQ4L235 1098 aaPredicted RBP16.83■□□□□ 0.28
CALD1-208ENST00000435928 C4orf50Q6ZRC1 276 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 CACNA2D4Q7Z3S7 1137 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 OSCP1Q8WVF1 389 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 ATP2A3Q93084 1043 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 SLC22A12Q96S37 553 aa16.83■□□□□ 0.28
CALD1-208ENST00000435928 DUS2Q9NX74 493 aaKnown RBP16.83■□□□□ 0.28
CALD1-208ENST00000435928 MORC2Q9Y6X9 1032 aaPredicted RBP16.83■□□□□ 0.28
CALD1-208ENST00000435928 KMT2BQ9UMN6 2715 aaPredicted RBP16.82■□□□□ 0.28
CALD1-208ENST00000435928 PTPRJQ12913 1337 aa16.82■□□□□ 0.28
CALD1-208ENST00000435928 AXIN1O15169 862 aa16.82■□□□□ 0.28
CALD1-208ENST00000435928 EPN2O95208 641 aa16.82■□□□□ 0.28
CALD1-208ENST00000435928 TNNC2P02585 160 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms