RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ELAC2Q9BQ52 826 aaKnown RBP19.56■□□□□ 0.72
CLK1-205ENST00000434813 SDCBP2Q9H190 292 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 ERAP1Q9NZ08 941 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 SNX3O60493 162 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 RASSF9O75901 435 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 IQCF3P0C7M6 154 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 MCF2P10911 925 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 ETS1P14921 441 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 GTF2A2P52657 109 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 PSMC1P62191 440 aaKnown RBP19.56■□□□□ 0.72
CLK1-205ENST00000434813 TAZQ16635 292 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 ARFGAP1Q8N6T3 406 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 HAUS1Q96CS2 278 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 ZBTB10Q96DT7 871 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 IFT122Q9HBG6 1241 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 GBA2Q9HCG7 927 aaPredicted RBP19.56■□□□□ 0.72
CLK1-205ENST00000434813 KCNK9Q9NPC2 374 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 TJP2Q9UDY2 1190 aa19.56■□□□□ 0.72
CLK1-205ENST00000434813 GPR25O00155 361 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 CYP2C8P10632 490 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 ATICP31939 592 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 TNFAIP2Q03169 654 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 PTPN11Q06124 597 aaPredicted RBP19.55■□□□□ 0.72
CLK1-205ENST00000434813 NR1H3Q13133 447 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 MPP2Q14168 576 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 HADHQ16836 314 aaKnown RBP19.55■□□□□ 0.72
CLK1-205ENST00000434813 TMEM63BQ5T3F8 832 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 BBS12Q6ZW61 710 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 XYLT1Q86Y38 959 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 TDRPQ86YL5 185 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 IFNLR1Q8IU57 520 aaPredicted RBP19.55■□□□□ 0.72
CLK1-205ENST00000434813 C2orf69Q8N8R5 385 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 ANKRD42Q8N9B4 389 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 TTC13Q8NBP0 860 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 SLC4A11Q8NBS3 891 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 CXorf38Q8TB03 319 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 CPXM1Q96SM3 734 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 TMEM121Q9BTD3 319 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 SMYD3Q9H7B4 428 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 VRTNQ9H8Y1 702 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 TBK1Q9UHD2 729 aa19.55■□□□□ 0.72
CLK1-205ENST00000434813 EXOC1LA0A1B0GW35 172 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 FOXO6A8MYZ6 492 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 TCP11X1B4DZS4 312 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 CILPO75339 1184 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 STAG3L1P0CL83 205 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 IL1R2P27930 398 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 MKRN3Q13064 507 aaKnown RBP19.54■□□□□ 0.72
CLK1-205ENST00000434813 AMHR2Q16671 573 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 ZNF484Q5JVG2 852 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 JADE1Q6IE81 842 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 ARHGEF18Q6ZSZ5 1173 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 SRRM1Q8IYB3 904 aaKnown RBP19.54■□□□□ 0.72
CLK1-205ENST00000434813 MAML1Q92585 1016 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 PRCCQ92733 491 aaPredicted RBP19.54■□□□□ 0.72
CLK1-205ENST00000434813 TWNKQ96RR1 684 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 PHACTR1Q9C0D0 580 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 RNPEPQ9H4A4 650 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 CCL15-CCL14A0A0B4J2E2 113 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 LACTBL1A8MY62 500 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 SGK1O00141 431 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 PDHXO00330 501 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 DNAJC8O75937 253 aaPredicted RBP19.54■□□□□ 0.72
CLK1-205ENST00000434813 ITGBL1O95965 494 aaPredicted RBP19.54■□□□□ 0.72
CLK1-205ENST00000434813 ERBB2P04626 1255 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 ITGB3P05106 788 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 GSTA1P08263 222 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 GCAP28676 217 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 CDH8P55286 799 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 CCNA1P78396 465 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 ZNF268Q14587 947 aaPredicted RBP19.54■□□□□ 0.72
CLK1-205ENST00000434813 CCL15Q16663 113 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 PPP1R21Q6ZMI0 780 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 LINC01465Q8N7H1 131 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 ASB7Q9H672 318 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 ZWILCHQ9H900 591 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 CYP3A43Q9HB55 503 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 SLC40A1Q9NP59 571 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 PDGFCQ9NRA1 345 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 METTL5Q9NRN9 209 aaKnown RBP19.54■□□□□ 0.72
CLK1-205ENST00000434813 FGFR1OP2Q9NVK5 253 aa19.54■□□□□ 0.72
CLK1-205ENST00000434813 ASB14A6NK59 587 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 GABRB2P47870 512 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 OTUD4Q01804 1114 aaKnown RBP19.53■□□□□ 0.72
CLK1-205ENST00000434813 PLCB3Q01970 1234 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 FASTKD3Q14CZ7 662 aaKnown RBP19.53■□□□□ 0.72
CLK1-205ENST00000434813 TMED2Q15363 201 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 SMTNL2Q2TAL5 461 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 CENPUQ71F23 418 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 KIAA0319LQ8IZA0 1049 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 SHCBP1Q8NEM2 672 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 ACTL9Q8TC94 416 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 ELOVL4Q9GZR5 314 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 PDZD7Q9H5P4 517 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 SYNCQ9H7C4 482 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 PPCSQ9HAB8 311 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 UBN1Q9NPG3 1134 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 NKIRAS1Q9NYS0 192 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 HMGXB4Q9UGU5 601 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms