RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 PDIA2Q13087 525 aaKnown RBP14.36□□□□□ -0.11
COL6A3-207ENST00000433762 ZKSCAN8Q15776 578 aaPredicted RBP14.36□□□□□ -0.11
COL6A3-207ENST00000433762 ZNF699Q32M78 642 aa14.36□□□□□ -0.11
COL6A3-207ENST00000433762 METTL7BQ6UX53 244 aa14.36□□□□□ -0.11
COL6A3-207ENST00000433762 TSHZ1Q6ZSZ6 1077 aa14.36□□□□□ -0.11
COL6A3-207ENST00000433762 RIOX2Q8IUF8 465 aa14.36□□□□□ -0.11
COL6A3-207ENST00000433762 ZBED8Q8IZ13 594 aa14.36□□□□□ -0.11
COL6A3-207ENST00000433762 ANKRD36BP1Q96IX9 119 aa14.36□□□□□ -0.11
COL6A3-207ENST00000433762 MTMR12Q9C0I1 747 aa14.36□□□□□ -0.11
COL6A3-207ENST00000433762 XYLT2Q9H1B5 865 aa14.36□□□□□ -0.11
COL6A3-207ENST00000433762 AFG3L2Q9Y4W6 797 aa14.36□□□□□ -0.11
COL6A3-207ENST00000433762 APOC4-APOC2K7ER74 178 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 IL1BP01584 269 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 APOC2P02655 101 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 PRKCBP05771 671 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 KRT3P12035 628 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 TCF4P15884 667 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 ATP2A2P16615 1042 aaKnown RBP14.35□□□□□ -0.11
COL6A3-207ENST00000433762 PSMA2P25787 234 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 GABRB2P47870 512 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 ATP11AP98196 1134 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 PKN2Q16513 984 aaKnown RBP14.35□□□□□ -0.11
COL6A3-207ENST00000433762 SLC45A4Q5BKX6 768 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 MPZL3Q6UWV2 235 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 CMASQ8NFW8 434 aaPredicted RBP14.35□□□□□ -0.11
COL6A3-207ENST00000433762 KLRG1Q96E93 195 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 FAM118BQ9BPY3 351 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 CXorf56Q9H5V9 222 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 VRTNQ9H8Y1 702 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 MLXIPLQ9NP71 852 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 CYLDQ9NQC7 956 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 RABGEF1Q9UJ41 708 aa14.35□□□□□ -0.11
COL6A3-207ENST00000433762 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.35□□□□□ -0.11
COL6A3-207ENST00000433762 E7ENQ6 273 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 KDELR1P24390 212 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 GBP2P32456 591 aaPredicted RBP14.34□□□□□ -0.11
COL6A3-207ENST00000433762 GMPSP49915 693 aaPredicted RBP14.34□□□□□ -0.11
COL6A3-207ENST00000433762 LBX2Q6XYB7 198 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 PLPPR4Q7Z2D5 763 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 VSIG1Q86XK7 387 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 ANKLE1Q8NAG6 615 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 PRPF31Q8WWY3 499 aaKnown RBP14.34□□□□□ -0.11
COL6A3-207ENST00000433762 RSRC1Q96IZ7 334 aaKnown RBP14.34□□□□□ -0.11
COL6A3-207ENST00000433762 LRRC37BQ96QE4 947 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 MPHOSPH6Q99547 160 aaKnown RBP14.34□□□□□ -0.11
COL6A3-207ENST00000433762 MIS12Q9H081 205 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 VPS11Q9H270 941 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 PTPRHQ9HD43 1115 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 SAR1AQ9NR31 198 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 BATF3Q9NR55 127 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 KLHL11Q9NVR0 708 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 AGTPBP1Q9UPW5 1226 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 PAPPA2Q9BXP8 1791 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 CLUHO75153 1309 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 POC1B-GALNT4F8VUJ3 575 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 ACKR2O00590 384 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 C2CD2LO14523 706 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 LRCH4O75427 683 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 KRT16P08779 473 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 CA4P22748 312 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 STIP1P31948 543 aaKnown RBP14.34□□□□□ -0.11
COL6A3-207ENST00000433762 PCK1P35558 622 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 CTCFP49711 727 aaPredicted RBP14.34□□□□□ -0.11
COL6A3-207ENST00000433762 SLC26A2P50443 739 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 GPX6P59796 221 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 TFDP1Q14186 410 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 HHATQ5VTY9 493 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 TTC39CQ8N584 583 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 MAB21L3Q8N8X9 362 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 ACTL9Q8TC94 416 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 PYROXD1Q8WU10 500 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 C10orf82Q8WW14 230 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 TFAP2BQ92481 460 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 CPT1BQ92523 772 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 APBB2Q92870 758 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 TMEM121Q9BTD3 319 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 TUBB6Q9BUF5 446 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 NFKBIZQ9BYH8 718 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 RSAD1Q9HA92 442 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 CYP3A43Q9HB55 503 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 C15orf41Q9Y2V0 281 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 MGAMO43451 1857 aa14.34□□□□□ -0.11
COL6A3-207ENST00000433762 ZSCAN5DPP0CG00 497 aa14.33□□□□□ -0.11
COL6A3-207ENST00000433762 ATICP31939 592 aa14.33□□□□□ -0.11
COL6A3-207ENST00000433762 TNFSF9P41273 254 aa14.33□□□□□ -0.11
COL6A3-207ENST00000433762 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.11
COL6A3-207ENST00000433762 POU5F1BQ06416 359 aa14.33□□□□□ -0.11
COL6A3-207ENST00000433762 LAMTOR4Q0VGL1 99 aa14.33□□□□□ -0.11
COL6A3-207ENST00000433762 FASTKD3Q14CZ7 662 aaKnown RBP14.33□□□□□ -0.11
COL6A3-207ENST00000433762 PTPN20Q4JDL3 420 aa14.33□□□□□ -0.11
COL6A3-207ENST00000433762 FYB2Q5VWT5 728 aa14.33□□□□□ -0.11
COL6A3-207ENST00000433762 MZB1Q8WU39 189 aa14.33□□□□□ -0.11
COL6A3-207ENST00000433762 FZD8Q9H461 694 aa14.33□□□□□ -0.11
COL6A3-207ENST00000433762 PNMA3Q9UL41 463 aa14.33□□□□□ -0.11
COL6A3-207ENST00000433762 ENDOD1O94919 500 aa14.33□□□□□ -0.12
COL6A3-207ENST00000433762 RPA3P35244 121 aaPredicted RBP14.33□□□□□ -0.12
COL6A3-207ENST00000433762 PLCB3Q01970 1234 aa14.33□□□□□ -0.12
COL6A3-207ENST00000433762 MYO1EQ12965 1108 aa14.33□□□□□ -0.12
COL6A3-207ENST00000433762 KYAT1Q16773 422 aa14.33□□□□□ -0.12
COL6A3-207ENST00000433762 TXNRD3NBQ6F5E7 133 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms