RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 ZNF185O15231 689 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 ANP32CO43423 234 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 BBOX1O75936 387 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 DDX58O95786 925 aaKnown RBP6.91□□□□□ -1.3
HDAC9-213ENST00000433709 SBK3P0C264 359 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 VCAM1P19320 739 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 AKAP5P24588 427 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 FAM189BP81408 668 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 CREMQ03060 361 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 TLE1Q04724 770 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 CRY2Q49AN0 593 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 KHDC1Q4VXA5 237 aaKnown RBP6.91□□□□□ -1.3
HDAC9-213ENST00000433709 SLC10A5Q5PT55 438 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 FAM102AQ5T9C2 384 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-213ENST00000433709 DBX2Q6ZNG2 339 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 GADL1Q6ZQY3 521 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 FAM193BQ96PV7 902 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-213ENST00000433709 PSMD1Q99460 953 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 ZNF341Q9BYN7 854 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 GSTO2Q9H4Y5 243 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 TRPM5Q9NZQ8 1165 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 CHST2Q9Y4C5 530 aa6.91□□□□□ -1.3
HDAC9-213ENST00000433709 USP15Q9Y4E8 981 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-213ENST00000433709 LAS1LQ9Y4W2 734 aaKnown RBP6.91□□□□□ -1.3
HDAC9-213ENST00000433709 LAMB4A4D0S4 1761 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 DLEC1Q9Y238 1755 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 AFDNP55196 1824 aaKnown RBP6.9□□□□□ -1.3
HDAC9-213ENST00000433709 RECQL4O94761 1208 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 PRSS23O95084 383 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 RPLP2P05387 115 aaKnown RBP6.9□□□□□ -1.3
HDAC9-213ENST00000433709 ITGB1P05556 798 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 SLC6A4P31645 630 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 PIP4K2AP48426 406 aaPredicted RBP6.9□□□□□ -1.3
HDAC9-213ENST00000433709 ZNF267Q14586 743 aaPredicted RBP6.9□□□□□ -1.3
HDAC9-213ENST00000433709 RAB39AQ14964 217 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 HLFQ16534 295 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 NFE2Q16621 373 aaPredicted RBP6.9□□□□□ -1.3
HDAC9-213ENST00000433709 PDCD4Q53EL6 469 aaKnown RBP6.9□□□□□ -1.3
HDAC9-213ENST00000433709 DACT2Q5SW24 774 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 CCDC30Q5VVM6 783 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 IGFL4Q6B9Z1 124 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 COPS6Q7L5N1 327 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 PLBD2Q8NHP8 589 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 LRGUKQ96M69 825 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 DCLRE1CQ96SD1 692 aaKnown RBP6.9□□□□□ -1.3
HDAC9-213ENST00000433709 THUMPD2Q9BTF0 503 aaKnown RBP6.9□□□□□ -1.3
HDAC9-213ENST00000433709 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 NMRK2Q9NPI5 230 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 SLC2A4RGQ9NR83 387 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 FAM30AQ9NZY2 134 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 CALCOCO1Q9P1Z2 691 aa6.9□□□□□ -1.3
HDAC9-213ENST00000433709 NOB1Q9ULX3 412 aaKnown RBP6.9□□□□□ -1.3
HDAC9-213ENST00000433709 TNRC6CQ9HCJ0 1690 aaKnown RBP6.9□□□□□ -1.31
HDAC9-213ENST00000433709 BCORQ6W2J9 1755 aa6.9□□□□□ -1.31
HDAC9-213ENST00000433709 KDM3BQ7LBC6 1761 aa6.9□□□□□ -1.31
HDAC9-213ENST00000433709 SRCAPQ6ZRS2 3230 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 GRM6O15303 877 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 DTNBO60941 627 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 MALP21145 153 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 NR4A1P22736 598 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 PGS1Q32NB8 556 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 LSM12Q3MHD2 195 aaKnown RBP6.89□□□□□ -1.31
HDAC9-213ENST00000433709 IFIT1BQ5T764 474 aaKnown RBP6.89□□□□□ -1.31
HDAC9-213ENST00000433709 FNDC7Q5VTL7 733 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 TSHZ3Q63HK5 1081 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 GDF7Q7Z4P5 450 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 CCDC146Q8IYE0 955 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 ZNF276Q8N554 614 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 HPS3Q969F9 1004 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 MVB12AQ96EY5 273 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 STK31Q9BXU1 1019 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 TRMT112Q9UI30 125 aaKnown RBP6.89□□□□□ -1.31
HDAC9-213ENST00000433709 PNMA8BQ9ULN7 279 aaPredicted RBP6.89□□□□□ -1.31
HDAC9-213ENST00000433709 PCDHA3Q9Y5H8 950 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 SH3TC1Q8TE82 1336 aa6.89□□□□□ -1.31
HDAC9-213ENST00000433709 NPIPB8E9PQR5 432 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 AP1G1O43747 822 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 RFPL1O75677 317 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 NTSR2O95665 410 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 SCGB1D2O95969 90 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 CD1AP06126 327 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 GPTP24298 496 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 ZFP36P26651 326 aaKnown RBP6.88□□□□□ -1.31
HDAC9-213ENST00000433709 CYP2C19P33261 490 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 NEXNQ0ZGT2 675 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 AIMP1Q12904 312 aaKnown RBP6.88□□□□□ -1.31
HDAC9-213ENST00000433709 SNAPC2Q13487 334 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 TUBA3CQ13748 450 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 ATP2B3Q16720 1220 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 ATAT1Q5SQI0 421 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 AGAP9Q5VTM2 703 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 SUSD4Q5VX71 490 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 TUBA3EQ6PEY2 450 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 CRIP3Q6Q6R5 217 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 ZFPM1Q8IX07 1006 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 GRAMD1CQ8IYS0 662 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 GPC2Q8N158 579 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 SYNE4Q8N205 404 aa6.88□□□□□ -1.31
HDAC9-213ENST00000433709 SLC25A43Q8WUT9 341 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-213ENST00000433709 HACL1Q9UJ83 578 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms