RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 PROSCO94903 275 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 ERBB2P04626 1255 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 CLTBP09497 229 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 HSPA1AP0DMV8 641 aaKnown RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 HSPA1BP0DMV9 641 aaKnown RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 GABRB2P47870 512 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 BCAT1P54687 386 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 DSC1Q08554 894 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 NAA30Q147X3 362 aaPredicted RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 ELF2Q15723 593 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 CD101Q93033 1021 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 PAWRQ96IZ0 340 aaKnown RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 CARD9Q9H257 536 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 TMEM39AQ9NV64 488 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 RNF216Q9NWF9 866 aaPredicted RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 IP6K2Q9UHH9 426 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 CCDC66A2RUB6 948 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 TMEM191CA6NGB0 347 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 CEP104O60308 925 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 PFKMP08237 780 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 ADORA2BP29275 332 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 CTNNA1P35221 906 aaKnown RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 SNX16P57768 344 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 ITIH3Q06033 890 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 BST2Q10589 180 aaKnown RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 ZNF268Q14587 947 aaPredicted RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 PPP1R15BQ5SWA1 713 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 DEFB128Q7Z7B8 93 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 METTL23Q86XA0 190 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 XYLT1Q86Y38 959 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 ANKRD52Q8NB46 1076 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 SLC2A14Q8TDB8 520 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 HASPINQ8TF76 798 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 MS4A14Q96JA4 679 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 FAM193BQ96PV7 902 aaPredicted RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 TJP2Q9UDY2 1190 aa11.17□□□□□ -0.62
NEFM-202ENST00000433454 TIMM13Q9Y5L4 95 aaPredicted RBP11.17□□□□□ -0.62
NEFM-202ENST00000433454 GOLGA8SH3BPF8 625 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 I3L4J1 428 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 M0QZQ0 153 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 CAPN15O75808 1086 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 DDHD2O94830 711 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 GJB6O95452 261 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 KRT3P12035 628 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 PTPN1P18031 435 aaKnown RBP11.16□□□□□ -0.62
NEFM-202ENST00000433454 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
NEFM-202ENST00000433454 CTNNA2P26232 953 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 PCSK1P29120 753 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 MAN1A1P33908 653 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 RPL7AP62424 266 aaKnown RBP11.16□□□□□ -0.62
NEFM-202ENST00000433454 ZNF280BQ86YH2 543 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 COLGALT2Q8IYK4 626 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 ACTRT1Q8TDG2 376 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 STK32AQ8WU08 396 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 RSPH1Q8WYR4 309 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 LPIN3Q9BQK8 851 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 SYT15Q9BQS2 421 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 TMEM106CQ9BVX2 250 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 SMARCAL1Q9NZC9 954 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 EHD2Q9NZN4 543 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 SIGLEC16A6NMB1 481 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 E5RJQ4 531 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 PGRMC1O00264 195 aaKnown RBP11.16□□□□□ -0.62
NEFM-202ENST00000433454 B4GALT3O60512 393 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 CYP11A1P05108 521 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 CAPN2P17655 700 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 RFC2P35250 354 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 BRCC3P46736 316 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 SLC8A3P57103 927 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 PDE4CQ08493 712 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 TCTN1Q2MV58 587 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 CD300LGQ6UXG3 332 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 MICAL3Q7RTP6 2002 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 SPATA4Q8NEY3 305 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 SLC35F5Q8WV83 523 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 ALG3Q92685 438 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 KRT35Q92764 455 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 SUSD3Q96L08 255 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 HNRNPABQ99729 332 aaKnown RBP11.16□□□□□ -0.62
NEFM-202ENST00000433454 CDH9Q9ULB4 789 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
NEFM-202ENST00000433454 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
NEFM-202ENST00000433454 TMEM189-UBE2V1I3L0A0 370 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 ATP2C2O75185 946 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 ITGB1P05556 798 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 OR1G1P47890 313 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 MARCKSL1P49006 195 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 RGS7P49802 495 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 LRRC26Q2I0M4 334 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 MDH1BQ5I0G3 518 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 FAM102AQ5T9C2 384 aaPredicted RBP11.15□□□□□ -0.62
NEFM-202ENST00000433454 DCAF12L1Q5VU92 463 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 PMF1Q6P1K2 205 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 NECAB2Q7Z6G3 386 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 NPAS4Q8IUM7 802 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 RASGEF1CQ8N431 466 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 NOA1Q8NC60 698 aaKnown RBP11.15□□□□□ -0.62
NEFM-202ENST00000433454 MCRS1Q96EZ8 462 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms