RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LENG1Q96BZ8 264 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 GCNAQ96QF7 691 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 UNC45AQ9H3U1 944 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 ATRNL1Q5VV63 1379 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 FAM155BO75949 473 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 GDF11O95390 407 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 SETSIPP0DME0 302 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 ARP10275 920 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 RABGAP1LQ5R372 815 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 RNASEH2BQ5TBB1 312 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 ALLCQ8N6M5 410 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 GDPD5Q8WTR4 605 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 IL1RAPL1Q9NZN1 696 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 TAGLN3Q9UI15 199 aa12.1□□□□□ -0.47
HMGCS1-202ENST00000433297 COPEO14579 308 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 IMPDH2P12268 514 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 RPL7AP62424 266 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 COG7P83436 770 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 PDK3Q15120 406 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 RALGPS1Q5JS13 557 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 SH2D4BQ5SQS7 431 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 ADGRD1Q6QNK2 874 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 ACAD11Q709F0 780 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 FAM81BQ96LP2 452 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 PLEKHG4BQ96PX9 1271 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 STK32BQ9NY57 414 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 AGTPBP1Q9UPW5 1226 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 IVNS1ABPQ9Y6Y0 642 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 DDX60LQ5H9U9 1706 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 CYB561D2O14569 222 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 C6orf222P0C671 652 aaPredicted RBP12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 UNGP13051 313 aaPredicted RBP12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 NRLP54845 237 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 PDE1BQ01064 536 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 KLHL38Q2WGJ6 581 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 ZCCHC23Q6ZST2 131 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 ZFPM1Q8IX07 1006 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 EXD1Q8NHP7 514 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 PIP4K2CQ8TBX8 421 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 NCSTNQ92542 709 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 KLHL4Q9C0H6 718 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 MYH11P35749 1972 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 IRS2Q9Y4H2 1338 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 PSTPIP1O43586 416 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 PSMD10O75832 226 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 PABPC4LP0CB38 370 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 UQCRBP14927 111 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 DSG3P32926 999 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 BST1Q10588 318 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 NFIAQ12857 509 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 CHI3L2Q15782 390 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 TXNRD3NBQ6F5E7 133 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 SPOPLQ6IQ16 392 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 SV2AQ7L0J3 742 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 DHDDSQ86SQ9 333 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 PDSS2Q86YH6 399 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 STKLD1Q8NE28 680 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 PPP1R14CQ8TAE6 165 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 PACSIN3Q9UKS6 424 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 UBE4BO95155 1302 aa12.09□□□□□ -0.47
HMGCS1-202ENST00000433297 IGLV3-22A0A075B6J6 115 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 LOC100653049A0A140TA62 436 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 IQANK1A0A1B0GTG1 560 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 TCRBV7S3A2A0A539 114 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 PLSCR1O15162 318 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 KRT34O76011 436 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 KBTBD12Q3ZCT8 623 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 TCHHL1Q5QJ38 904 aaPredicted RBP12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 CDHR3Q6ZTQ4 885 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 KATNAL2Q8IYT4 538 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 PRPF31Q8WWY3 499 aaKnown RBP12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 RSAD2Q8WXG1 361 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 ALKBH8Q96BT7 664 aaKnown RBP12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 CLMNQ96JQ2 1002 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 EBF4Q9BQW3 602 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 S100A14Q9HCY8 104 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 ADAMTS6Q9UKP5 1117 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 ROBO1Q9Y6N7 1651 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 F8VP50 259 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 GALK1P51570 392 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 GDF10P55107 478 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 ZNF200P98182 395 aaPredicted RBP12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 TMEM62Q0P6H9 643 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 MAMLD1Q13495 774 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 GRAPQ13588 217 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 SMTNL2Q2TAL5 461 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 DNAL1Q4LDG9 190 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 EFHC1Q5JVL4 640 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 FAM102BQ5T8I3 360 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 MAP7D3Q8IWC1 876 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 PDIK1LQ8N165 341 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 PPM1NQ8N819 430 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 GRAPLQ8TC17 118 aaPredicted RBP12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 MIPOL1Q8TD10 442 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 DCAKDQ8WVC6 231 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 APOL6Q9BWW8 343 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 GRIP2Q9C0E4 1043 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 GGA1Q9UJY5 639 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 SPATA31A5Q5VU36 1347 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms