RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 GPR161Q8N6U8 529 aaKnown RBP17.35■□□□□ 0.37
AC055876.3-201ENST00000431496 STKLD1Q8NE28 680 aa17.35■□□□□ 0.37
AC055876.3-201ENST00000431496 MRPS31Q92665 395 aaKnown RBP17.35■□□□□ 0.37
AC055876.3-201ENST00000431496 SECISBP2LQ93073 1101 aaKnown RBP17.35■□□□□ 0.37
AC055876.3-201ENST00000431496 MYRFLQ96LU7 910 aa17.35■□□□□ 0.37
AC055876.3-201ENST00000431496 C7orf25Q9BPX7 421 aa17.35■□□□□ 0.37
AC055876.3-201ENST00000431496 TDP1Q9NUW8 608 aa17.35■□□□□ 0.37
AC055876.3-201ENST00000431496 CCL26Q9Y258 94 aa17.35■□□□□ 0.37
AC055876.3-201ENST00000431496 PTPRJQ12913 1337 aa17.35■□□□□ 0.37
AC055876.3-201ENST00000431496 EIF3DO15371 548 aaKnown RBP eCLIP17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 HCRTO43612 131 aa17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 NOL4O94818 638 aa17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 PAPSS2O95340 614 aaPredicted RBP17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 TNNC2P02585 160 aa17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 PDIA4P13667 645 aaKnown RBP17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 CCINQ13939 588 aa17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 FAM26FQ5R3K3 315 aa17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 FOXD4L5Q5VV16 416 aaPredicted RBP17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 SDK1Q7Z5N4 2213 aa17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 SPATA2LQ8IUW3 424 aaPredicted RBP17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 SYNPOQ8N3V7 929 aa17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 FOXD4L4Q8WXT5 416 aaPredicted RBP17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 TRMT2BQ96GJ1 504 aaKnown RBP17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 FUBP3Q96I24 572 aaKnown RBP eCLIP17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 UXTQ9UBK9 157 aaPredicted RBP17.34■□□□□ 0.37
AC055876.3-201ENST00000431496 DENND4CQ5VZ89 1909 aa17.33■□□□□ 0.37
AC055876.3-201ENST00000431496 TGFB1I1O43294 461 aa17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 ATP2C2O75185 946 aa17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 LMO2P25791 158 aa17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 PUM1Q14671 1186 aaKnown RBP eCLIP17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 CCDC142Q17RM4 750 aa17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 Q6ZS52 159 aa17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 WDR49Q8IV35 697 aa17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 KBTBD7Q8WVZ9 684 aa17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 KIF9Q9HAQ2 790 aa17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 AGPAT3Q9NRZ7 376 aa17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 DNAH14Q0VDD8 3507 aa17.33■□□□□ 0.36
AC055876.3-201ENST00000431496 ZNF638Q14966 1978 aaKnown RBP17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 OTOL1A6NHN0 477 aaPredicted RBP17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 K7ESF4 209 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 POLR2DO15514 142 aaKnown RBP17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 MAGEA11P43364 429 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 SNRPFP62306 86 aaKnown RBP17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 EHHADHQ08426 723 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 DMWDQ09019 674 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 RUNX3Q13761 415 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 ZNF268Q14587 947 aaPredicted RBP17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 UNC13DQ70J99 1090 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 TRAPPC11Q7Z392 1133 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 SCN4BQ8IWT1 228 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 RDH13Q8NBN7 331 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 SCFD1Q8WVM8 642 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 EBF3Q9H4W6 596 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 MAGEF1Q9HAY2 307 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 HPS4Q9NQG7 708 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 C2orf42Q9NWW7 574 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 DLL3Q9NYJ7 618 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 MAGEC2Q9UBF1 373 aaPredicted RBP17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 CDH9Q9ULB4 789 aa17.32■□□□□ 0.36
AC055876.3-201ENST00000431496 CHURC1-FNTBB4DL54 471 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 CLIC2O15247 247 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 HRO43593 1189 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 TADA3O75528 432 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 CST3P01034 146 aaPredicted RBP17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 TGM1P22735 817 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 WARSP23381 471 aaKnown RBP17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 HOXA6P31267 233 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 FNTBP49356 437 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 RSPO4Q2I0M5 234 aaPredicted RBP17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 FOXD4L6Q3SYB3 417 aaPredicted RBP17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 TRIM68Q6AZZ1 485 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 CC2D1AQ6P1N0 951 aaPredicted RBP17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 FOXD4L3Q6VB84 417 aaPredicted RBP17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 C4orf50Q6ZRC1 276 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 DGLUCYQ7Z3D6 616 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 RIN3Q8TB24 985 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 CYP2S1Q96SQ9 504 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 SYT15Q9BQS2 421 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 BLZF1Q9H2G9 400 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 CRTAC1Q9NQ79 661 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 RAB23Q9ULC3 237 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 PCDHA7Q9UN72 937 aa17.31■□□□□ 0.36
AC055876.3-201ENST00000431496 UBE4BO95155 1302 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 PVALEFA0A1B0GWK0 134 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 TRDMT1O14717 391 aaKnown RBP17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 PDGFRBP09619 1106 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 FAM163BP0C2L3 166 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 DLATP10515 647 aaKnown RBP17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 TNNI1P19237 187 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 CASP1P29466 404 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 CNR2P34972 360 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 CYP2J2P51589 502 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 PSMC1P62191 440 aaKnown RBP17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 AMPD2Q01433 879 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 CYP24A1Q07973 514 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 PSMD6Q15008 389 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 PDGFRLQ15198 375 aa17.3■□□□□ 0.36
AC055876.3-201ENST00000431496 MAPRE1Q15691 268 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms