RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 SYT10Q6XYQ8 523 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 MON1BQ7L1V2 547 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 RHOT2Q8IXI1 618 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 MCOLN2Q8IZK6 566 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 MICALL1Q8N3F8 863 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 TRIM58Q8NG06 486 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 COLEC11Q9BWP8 271 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 DPEP3Q9H4B8 488 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 DDX43Q9NXZ2 648 aaKnown RBP19.32■□□□□ 0.68
HMGN1-206ENST00000431390 PAXBP1Q9Y5B6 917 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 MYH10P35580 1976 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 ZBBXA8MT70 800 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 NRP1O14786 923 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 PDGFRBP09619 1106 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 SSTR3P32745 418 aaPredicted RBP19.32■□□□□ 0.68
HMGN1-206ENST00000431390 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
HMGN1-206ENST00000431390 PPP1R26Q5T8A7 1209 aaPredicted RBP19.32■□□□□ 0.68
HMGN1-206ENST00000431390 DENND1BQ6P3S1 775 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 C12orf29Q8N999 325 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 B3GALNT2Q8NCR0 500 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 C1orf131Q8NDD1 294 aaKnown RBP19.32■□□□□ 0.68
HMGN1-206ENST00000431390 HASPINQ8TF76 798 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 ZNF689Q96CS4 500 aaPredicted RBP19.32■□□□□ 0.68
HMGN1-206ENST00000431390 ALS2CR12Q96Q35 445 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 DNAI1Q9UI46 699 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 TSPAN16Q9UKR8 245 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 FAN1Q9Y2M0 1017 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 PRG3Q9Y2Y8 225 aaPredicted RBP19.32■□□□□ 0.68
HMGN1-206ENST00000431390 SLC4A7Q9Y6M7 1214 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 PTPRSQ13332 1948 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 I3L4J1 428 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 HCRTO43612 131 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 TADA2AO75478 443 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 MOCS3O95396 460 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 CYP1A2P05177 515 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 MMP8P22894 467 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 PCSK1P29120 753 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 HADHBP55084 474 aaKnown RBP19.31■□□□□ 0.68
HMGN1-206ENST00000431390 DEFB103AP81534 67 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 SLC35F6Q8N357 371 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 WDTC1Q8N5D0 677 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 KIF18AQ8NI77 898 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 ZNF653Q96CK0 615 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 ARHGEF26Q96DR7 871 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 WDR24Q96S15 920 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 RC3H2Q9HBD1 1191 aaKnown RBP19.31■□□□□ 0.68
HMGN1-206ENST00000431390 AVENQ9NQS1 362 aaPredicted RBP19.31■□□□□ 0.68
HMGN1-206ENST00000431390 ADAM28Q9UKQ2 775 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 CDH9Q9ULB4 789 aa19.31■□□□□ 0.68
HMGN1-206ENST00000431390 F8W810 466 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 M0QYV0 167 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 BUB1O43683 1085 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 CALB1P05937 261 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 GALTP07902 379 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 SLC11A1P49279 550 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 NAP1L1P55209 391 aaKnown RBP19.3■□□□□ 0.68
HMGN1-206ENST00000431390 SLC35G2Q8TBE7 412 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 NECAB3Q96P71 396 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-206ENST00000431390 FAM49BQ9NUQ9 324 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 ADAM22Q9P0K1 906 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 UVRAGQ9P2Y5 699 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 HESX1Q9UBX0 185 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 PCDHGC5Q9Y5F6 944 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 TIMM13Q9Y5L4 95 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-206ENST00000431390 CAPN6Q9Y6Q1 641 aa19.3■□□□□ 0.68
HMGN1-206ENST00000431390 SYN3O14994 580 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 MTA2O94776 668 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 SETSIPP0DME0 302 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 PTPN1P18031 435 aaKnown RBP19.29■□□□□ 0.68
HMGN1-206ENST00000431390 CASQ1P31415 396 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 GPD2P43304 727 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 NOP2P46087 812 aaKnown RBP19.29■□□□□ 0.68
HMGN1-206ENST00000431390 PTP4A2Q12974 167 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 GOLGA7BQ2TAP0 167 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 PKDCCQ504Y2 493 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 LIN9Q5TKA1 542 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 OVOS1Q6IE37 1185 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 CMTR2Q8IYT2 770 aaKnown RBP19.29■□□□□ 0.68
HMGN1-206ENST00000431390 MSANTD4Q8NCY6 345 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 SYT15Q9BQS2 421 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 ACBD6Q9BR61 282 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 CWH43Q9H720 699 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 MARCH5Q9NX47 278 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 CNOT8Q9UFF9 292 aaKnown RBP19.29■□□□□ 0.68
HMGN1-206ENST00000431390 PCDHA11Q9Y5I1 949 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 NCOR1O75376 2440 aa19.29■□□□□ 0.68
HMGN1-206ENST00000431390 CARNS1A5YM72 827 aa19.28■□□□□ 0.68
HMGN1-206ENST00000431390 ACAT1P24752 427 aaKnown RBP19.28■□□□□ 0.68
HMGN1-206ENST00000431390 BCAR1P56945 870 aa19.28■□□□□ 0.68
HMGN1-206ENST00000431390 ELAVL2Q12926 359 aaKnown RBP19.28■□□□□ 0.68
HMGN1-206ENST00000431390 ERICH1Q86X53 443 aa19.28■□□□□ 0.68
HMGN1-206ENST00000431390 THEM5Q8N1Q8 247 aa19.28■□□□□ 0.68
HMGN1-206ENST00000431390 ANKRD52Q8NB46 1076 aa19.28■□□□□ 0.68
HMGN1-206ENST00000431390 ZNF592Q92610 1267 aa19.28■□□□□ 0.68
HMGN1-206ENST00000431390 HNRNPABQ99729 332 aaKnown RBP19.28■□□□□ 0.68
HMGN1-206ENST00000431390 RTP3Q9BQQ7 232 aa19.28■□□□□ 0.68
HMGN1-206ENST00000431390 C11orf70Q9BRQ4 267 aa19.28■□□□□ 0.68
HMGN1-206ENST00000431390 STRIP2Q9ULQ0 834 aa19.28■□□□□ 0.68
HMGN1-206ENST00000431390 VWA8A3KMH1 1905 aa19.28■□□□□ 0.68
HMGN1-206ENST00000431390 FANCGO15287 622 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms