RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 FXR1P51114 621 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHD4-202ENST00000430771 CLCN4P51793 760 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 BCAT1P54687 386 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 SLC8A3P57103 927 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 TBX2Q13207 712 aaPredicted RBP11.68□□□□□ -0.54
CHD4-202ENST00000430771 GOLGA7BQ2TAP0 167 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 TDRD12Q587J7 1177 aaKnown RBP11.68□□□□□ -0.54
CHD4-202ENST00000430771 RSPO2Q6UXX9 243 aaPredicted RBP11.68□□□□□ -0.54
CHD4-202ENST00000430771 CCDC149Q6ZUS6 474 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 SLC2A14Q8TDB8 520 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 EPS8L1Q8TE68 723 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 CPLX3Q8WVH0 158 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 FAM161BQ96MY7 647 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 PGLYRP2Q96PD5 576 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 HNRNPABQ99729 332 aaKnown RBP11.68□□□□□ -0.54
CHD4-202ENST00000430771 ABHD10Q9NUJ1 306 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 GTF3C4Q9UKN8 822 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 TSPAN16Q9UKR8 245 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 MYH10P35580 1976 aa11.68□□□□□ -0.54
CHD4-202ENST00000430771 MTCL1Q9Y4B5 1905 aaKnown RBP11.68□□□□□ -0.54
CHD4-202ENST00000430771 M0QYV0 167 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 RNF225M0QZC1 329 aaPredicted RBP11.67□□□□□ -0.54
CHD4-202ENST00000430771 O00370 1275 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 PRRG1O14668 218 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 TGM5O43548 720 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 CLASP2O75122 1294 aaKnown RBP11.67□□□□□ -0.54
CHD4-202ENST00000430771 ABLIM3O94929 683 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 SETSIPP0DME0 302 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 ATF2P15336 505 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 POU3F3P20264 500 aaPredicted RBP11.67□□□□□ -0.54
CHD4-202ENST00000430771 ANXA13P27216 316 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 CLCN1P35523 988 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 PRKCIP41743 596 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 MAGEA11P43364 429 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 NRIP1P48552 1158 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 GSDMDP57764 484 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 ARID5AQ03989 594 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 ADCY1Q08828 1119 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 KLHL30Q0D2K2 578 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 ARID5BQ14865 1188 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 MGAT5BQ3V5L5 792 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 PPP1R26Q5T8A7 1209 aaPredicted RBP11.67□□□□□ -0.54
CHD4-202ENST00000430771 VSTM1Q6UX27 236 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 RNF19BQ6ZMZ0 732 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 RTL10Q7L3V2 364 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 ADGRD2Q7Z7M1 963 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 LRRTM3Q86VH5 581 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 SLC47A2Q86VL8 602 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 VPS36Q86VN1 386 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 PALB2Q86YC2 1186 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 C12orf29Q8N999 325 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 SPC24Q8NBT2 197 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 OR8K1Q8NGG5 319 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 HDAC7Q8WUI4 952 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 CASP10Q92851 521 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 CYFIP2Q96F07 1278 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 DNAJC7Q99615 494 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 SEPT5Q99719 369 aaPredicted RBP11.67□□□□□ -0.54
CHD4-202ENST00000430771 ZNF518BQ9C0D4 1074 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 PDCL3Q9H2J4 239 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 PLEKHA4Q9H4M7 779 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 CYP4F11Q9HBI6 524 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 DMAP1Q9NPF5 467 aaPredicted RBP11.67□□□□□ -0.54
CHD4-202ENST00000430771 MAN1C1Q9NR34 630 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 TMLHEQ9NVH6 421 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 DZANK1Q9NVP4 752 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 AIPL1Q9NZN9 384 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHD4-202ENST00000430771 MTCH2Q9Y6C9 303 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 BZW2Q9Y6E2 419 aaKnown RBP11.67□□□□□ -0.54
CHD4-202ENST00000430771 MYO9BQ13459 2157 aa11.67□□□□□ -0.54
CHD4-202ENST00000430771 CHD9Q3L8U1 2897 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 MYO16Q9Y6X6 1858 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 NCK2O43639 380 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 AP1G2O75843 785 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 LRG1P02750 347 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 FOSL2P15408 326 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 NPR3P17342 541 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 IGFBP4P22692 258 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 HNRNPH3P31942 346 aaKnown RBP11.66□□□□□ -0.54
CHD4-202ENST00000430771 TUFMP49411 452 aaKnown RBP11.66□□□□□ -0.54
CHD4-202ENST00000430771 RPL10AP62906 217 aaKnown RBP11.66□□□□□ -0.54
CHD4-202ENST00000430771 CDR2Q01850 454 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 BST2Q10589 180 aaKnown RBP11.66□□□□□ -0.54
CHD4-202ENST00000430771 CNGA2Q16280 664 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 CCDC142Q17RM4 750 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 TCEAL5Q5H9L2 206 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 LCLAT1Q6UWP7 414 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 TRIM72Q6ZMU5 477 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 RBM23Q86U06 439 aaKnown RBP11.66□□□□□ -0.54
CHD4-202ENST00000430771 TCEAL8Q8IYN2 117 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 FUKQ8N0W3 1084 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 DEFB123Q8N688 67 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 ATAD1Q8NBU5 361 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 KREMEN2Q8NCW0 462 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 ZNF606Q8WXB4 792 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 CEP295NLQ96MC4 621 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 NOX5Q96PH1 765 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 B3GNT5Q9BYG0 378 aa11.66□□□□□ -0.54
CHD4-202ENST00000430771 PCDHGC3Q9UN70 934 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms