RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 NR3C2P08235 984 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 CLTAP09496 248 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 CYP2C8P10632 490 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 ACO1P21399 889 aaKnown RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 HOXD10P28358 340 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 GNA15P30679 374 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 ALDH3A1P30838 453 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 RASSF2P50749 326 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 NCALDP61601 193 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 YWHAEP62258 255 aaKnown RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 NOMO3P69849 1222 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 NFX1Q12986 1120 aaKnown RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 TRIM32Q13049 653 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 PIGHQ14442 188 aaPredicted RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 SPARCL1Q14515 664 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 SPRED3Q2MJR0 410 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 CEP57Q86XR8 500 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 TTC13Q8NBP0 860 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 CFAP61Q8NHU2 1237 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 CPA5Q8WXQ8 436 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 BSNDQ8WZ55 320 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 KLHL29Q96CT2 875 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 RSRC1Q96IZ7 334 aaKnown RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 TGS1Q96RS0 853 aaKnown RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 IMPG2Q9BZV3 1241 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 POLR3FQ9H1D9 316 aaPredicted RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 CXorf56Q9H5V9 222 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 ECT2Q9H8V3 914 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 JPH1Q9HDC5 661 aaPredicted RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 ACP6Q9NPH0 428 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 BATF3Q9NR55 127 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 ARHGEF3Q9NR81 526 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 TOPORSQ9NS56 1045 aaPredicted RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 FGFR1OP2Q9NVK5 253 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 EURLQ9NYK6 297 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 SLC9A2Q9UBY0 812 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 CHORDC1Q9UHD1 332 aaPredicted RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 BAIAP2L1Q9UHR4 511 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 OGDHLQ9ULD0 1010 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 RPL26L1Q9UNX3 145 aaKnown RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 VWA5AO00534 786 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 ALOX15BO15296 676 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 LIASO43766 372 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 KIF1CO43896 1103 aaKnown RBP9.16□□□□□ -0.94
GABPB1-205ENST00000429662 DCTN3O75935 186 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 UBOX5O94941 541 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 CCNB1P14635 433 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 KCNA2P16389 499 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 ELF1P32519 619 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 PHBP35232 272 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 RFC5P40937 340 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 FCGRTP55899 365 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 SLC8A3P57103 927 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 ATP11AP98196 1134 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 RNASELQ05823 741 aaKnown RBP9.16□□□□□ -0.94
GABPB1-205ENST00000429662 LRRC26Q2I0M4 334 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 PARP6Q2NL67 630 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 CCDC38Q502W7 563 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 FAM133BQ5BKY9 247 aaKnown RBP9.16□□□□□ -0.94
GABPB1-205ENST00000429662 TJAP1Q5JTD0 557 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 SWSAP1Q6NVH7 229 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 ABHD15Q6UXT9 468 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 CENPUQ71F23 418 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 TBC1D1Q86TI0 1168 aaPredicted RBP9.16□□□□□ -0.94
GABPB1-205ENST00000429662 FAM228AQ86W67 206 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 EXOC8Q8IYI6 725 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 AGGF1Q8N302 714 aaeCLIP9.16□□□□□ -0.94
GABPB1-205ENST00000429662 ALLCQ8N6M5 410 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 NIPA2Q8N8Q9 360 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 ANKRD42Q8N9B4 389 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 RBBP8NLQ8NC74 664 aaPredicted RBP9.16□□□□□ -0.94
GABPB1-205ENST00000429662 TMEM35BQ8NCS4 154 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 DEPTORQ8TB45 409 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 ZNF398Q8TD17 642 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 MGARPQ8TDB4 240 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 MAML1Q92585 1016 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 ZNF516Q92618 1163 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 NKD2Q969F2 451 aaPredicted RBP9.16□□□□□ -0.94
GABPB1-205ENST00000429662 ALKBH8Q96BT7 664 aaKnown RBP9.16□□□□□ -0.94
GABPB1-205ENST00000429662 FAXDC2Q96IV6 333 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 SMC6Q96SB8 1091 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 RBM15Q96T37 977 aaKnown RBP eCLIP9.16□□□□□ -0.947e-13■■■■■ 35
GABPB1-205ENST00000429662 TUBB6Q9BUF5 446 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 PITPNM3Q9BZ71 974 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 EBF2Q9HAK2 575 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 RNF146Q9NTX7 359 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 NOP53Q9NZM5 478 aaKnown RBP9.16□□□□□ -0.94
GABPB1-205ENST00000429662 SHOC2Q9UQ13 582 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 USH1CQ9Y6N9 552 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 DOCK1Q14185 1865 aa9.16□□□□□ -0.94
GABPB1-205ENST00000429662 EXOC1LA0A1B0GW35 172 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 TMEM191CA6NGB0 347 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 SPATA31C2B4DYI2 1134 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 RASA4BC9J798 803 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 K7ERI5 159 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 RASA4O43374 803 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 ZNF862O60290 1169 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 ITGAVP06756 1048 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 TMEM191BP0C7N4 346 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 SUPT20HL2P0C7V6 817 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms