RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 HNRNPA1P09651 372 aaKnown RBP eCLIP15.5■□□□□ 0.07
SGCE-204ENST00000428696 CD19P15391 556 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 ADORA2BP29275 332 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 MFAP3P55082 362 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 NTHL1P78549 312 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 CBX2Q14781 532 aaPredicted RBP15.5■□□□□ 0.07
SGCE-204ENST00000428696 VEPH1Q14D04 833 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 FILIP1LQ4L180 1135 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 FAM171BQ6P995 826 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 TRIM65Q6PJ69 517 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 TMEM270Q6UE05 265 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 GPR149Q86SP6 731 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 UNC93AQ86WB7 457 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 C2orf15Q8WU43 125 aaKnown RBP15.5■□□□□ 0.07
SGCE-204ENST00000428696 PCED1BQ96HM7 432 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 TMEM176AQ96HP8 235 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 TWNKQ96RR1 684 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 B3GNT5Q9BYG0 378 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 ELOVL4Q9GZR5 314 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 HCFC1R1Q9NWW0 138 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 MAFFQ9ULX9 164 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 CILPO75339 1184 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 HAPLN1P10915 354 aaPredicted RBP15.49■□□□□ 0.07
SGCE-204ENST00000428696 CCDC130P13994 396 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 IL9P15248 144 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 ZNF18P17022 549 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 MTHFRP42898 656 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 GPR15P49685 360 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 PLCB2Q00722 1185 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 PUS10Q3MIT2 529 aaKnown RBP15.49■□□□□ 0.07
SGCE-204ENST00000428696 TTC39CQ8N584 583 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 SLC2A14Q8TDB8 520 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 ZNF707Q96C28 371 aaPredicted RBP15.49■□□□□ 0.07
SGCE-204ENST00000428696 RPGRIP1Q96KN7 1286 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 HSD3B7Q9H2F3 369 aa15.49■□□□□ 0.07
SGCE-204ENST00000428696 MAGED2Q9UNF1 606 aaPredicted RBP15.49■□□□□ 0.07
SGCE-204ENST00000428696 ATP8B3O60423 1300 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 GTPBP10A4D1E9 387 aaKnown RBP15.48■□□□□ 0.07
SGCE-204ENST00000428696 MYL4P12829 197 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 PTPN2P17706 415 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 ANXA13P27216 316 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 KLK7P49862 253 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 RPL10AP62906 217 aaKnown RBP15.48■□□□□ 0.07
SGCE-204ENST00000428696 INCA1Q0VD86 236 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 PLD1Q13393 1074 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 RAPGEF1Q13905 1077 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 CYP4A22Q5TCH4 519 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 CRYBG2Q8N1P7 616 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 STKLD1Q8NE28 680 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 WHAMMQ8TF30 809 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 JAKMIP2Q96AA8 810 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 CYFIP2Q96F07 1278 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 FAXDC2Q96IV6 333 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 PKMYT1Q99640 499 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 ZNF518BQ9C0D4 1074 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 FAM207AQ9NSI2 230 aaPredicted RBP15.48■□□□□ 0.07
SGCE-204ENST00000428696 CEP72Q9P209 647 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 APEX2Q9UBZ4 518 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 DNAJC12Q9UKB3 198 aa15.48■□□□□ 0.07
SGCE-204ENST00000428696 PLXNA3P51805 1871 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 LGALS16A8MUM7 142 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 CALCAP01258 141 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 HOXA9P31269 272 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 RAD23BP54727 409 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 KCNMA1Q12791 1236 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 IFRD2Q12894 506 aaPredicted RBP15.47■□□□□ 0.07
SGCE-204ENST00000428696 SYCP1Q15431 976 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 PTPN21Q16825 1174 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 PABPC1LQ4VXU2 614 aaKnown RBP15.47■□□□□ 0.07
SGCE-204ENST00000428696 RTL10Q7L3V2 364 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 DNAJB7Q7Z6W7 309 aaPredicted RBP15.47■□□□□ 0.07
SGCE-204ENST00000428696 HS6ST3Q8IZP7 471 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 CMASQ8NFW8 434 aaPredicted RBP15.47■□□□□ 0.07
SGCE-204ENST00000428696 KREMEN1Q96MU8 473 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 POMKQ9H5K3 350 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 ABCB6Q9NP58 842 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 BRWD1Q9NSI6 2320 aa15.47■□□□□ 0.07
SGCE-204ENST00000428696 AP1G2O75843 785 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 FSHRP23945 695 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 GBP2P32456 591 aaPredicted RBP15.46■□□□□ 0.07
SGCE-204ENST00000428696 SSTR3P32745 418 aaPredicted RBP15.46■□□□□ 0.07
SGCE-204ENST00000428696 MAP3K7CLP57077 242 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 GCNT1Q02742 428 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 CYP26C1Q6V0L0 522 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 PDZD4Q76G19 769 aaPredicted RBP15.46■□□□□ 0.07
SGCE-204ENST00000428696 GET4Q7L5D6 327 aaPredicted RBP15.46■□□□□ 0.07
SGCE-204ENST00000428696 ENOSF1Q7L5Y1 443 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 ITIH5Q86UX2 942 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 SLC4A11Q8NBS3 891 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 RBBP8NLQ8NC74 664 aaPredicted RBP15.46■□□□□ 0.07
SGCE-204ENST00000428696 ING5Q8WYH8 240 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 FUBP3Q96I24 572 aaKnown RBP eCLIP15.46■□□□□ 0.07
SGCE-204ENST00000428696 FAM81BQ96LP2 452 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 NECTIN4Q96NY8 510 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 ASAH2Q9NR71 780 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 KRT82Q9NSB4 513 aa15.46■□□□□ 0.07
SGCE-204ENST00000428696 DNMT3BQ9UBC3 853 aaKnown RBP15.46■□□□□ 0.07
SGCE-204ENST00000428696 MRPS23Q9Y3D9 190 aaKnown RBP15.46■□□□□ 0.07
SGCE-204ENST00000428696 LRRC10BA6NIK2 292 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 F8VP50 259 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms