RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 CTBP1Q13363 440 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 BMPR2Q13873 1038 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 PTCHD3Q3KNS1 767 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 FCRLBQ6BAA4 426 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 RGS7BPQ6MZT1 257 aaPredicted RBP4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 ZDHHC24Q6UX98 284 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 GLCCI1Q86VQ1 547 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 DENND1CQ8IV53 801 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 GLG1Q92896 1179 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 ZNF778Q96MU6 729 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 SH2D3AQ9BRG2 576 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 MESP1Q9BRJ9 268 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 CXorf36Q9H7Y0 433 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 TYW1Q9NV66 732 aaKnown RBP4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 PNMA8BQ9ULN7 279 aaPredicted RBP4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 MED16Q9Y2X0 877 aa4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.27□□□□□ -1.73
TIMM9P3-201ENST00000428659 TARM1B6A8C7 271 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 TISP43B9A030 160 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 H3BML4 177 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 INO80B-WBP1J3KQ70 363 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 PDE8BO95263 885 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 LATS1O95835 1130 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 FAM163BP0C2L3 166 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 CYP2C18P33260 490 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 ANAPC15P60006 121 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 IGBP1P78318 339 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 CYP4F2P78329 520 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 MYO1EQ12965 1108 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 FGL2Q14314 439 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 IQCB1Q15051 598 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 PROSER3Q2NL68 480 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 ICE2Q659A1 982 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 NPNTQ6UXI9 565 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 ZNF551Q7Z340 670 aaPredicted RBP4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 SLC15A4Q8N697 577 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 DNAJC5GQ8N7S2 189 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 NELL1Q92832 810 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 DDX17Q92841 729 aaKnown RBP4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 R3HDM4Q96D70 268 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 PTDSS2Q9BVG9 487 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 ALG8Q9BVK2 526 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 TRIM54Q9BYV2 358 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 INO80BQ9C086 356 aaPredicted RBP4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 SARS2Q9NP81 518 aaKnown RBP4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 SH3BP4Q9P0V3 963 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 DDX20Q9UHI6 824 aaKnown RBP4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 PADI4Q9UM07 663 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 PLEKHM1Q9Y4G2 1056 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 WNT6Q9Y6F9 365 aa4.26□□□□□ -1.73
TIMM9P3-201ENST00000428659 A1L4Q6 167 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 WDR91A4D1P6 747 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 TUSC2O75896 110 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 SOAT2O75908 522 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 CT47B1P0C2W7 299 aaPredicted RBP4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 ATXN1LP0C7T5 689 aaKnown RBP4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 ENGP17813 658 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 MPGP29372 298 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 PXNP49023 591 aaPredicted RBP4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 AGFG1P52594 562 aaKnown RBP4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 LLGL1Q15334 1064 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 PLEKHG6Q3KR16 790 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 PAPD7Q5XG87 772 aaKnown RBP4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 NAPRTQ6XQN6 538 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 DPY19L3Q6ZPD9 716 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 IL31RAQ8NI17 732 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 HASPINQ8TF76 798 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 RUNDC1Q96C34 613 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 AIFM3Q96NN9 605 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 LENG8Q96PV6 779 aaPredicted RBP4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 QTRT1Q9BXR0 403 aaKnown RBP4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 B3GNT5Q9BYG0 378 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 AS3MTQ9HBK9 375 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 DUSP22Q9NRW4 184 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 STK32BQ9NY57 414 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 RNF7Q9UBF6 113 aa4.25□□□□□ -1.73
TIMM9P3-201ENST00000428659 A0A087WWL8 130 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 BTN3A1O00481 513 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 TBX3O15119 743 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 RFPL1O75677 317 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 PRKCGP05129 697 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 SFPQP23246 707 aaKnown RBP eCLIP4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 ATXN1P54253 815 aaKnown RBP4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 LOXL3P58215 753 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 DEPDC1Q5TB30 811 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 KCTD20Q7Z5Y7 419 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 TMEM171Q8WVE6 324 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 RAPGEF4Q8WZA2 1011 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 CAMKK2Q96RR4 588 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 NELL2Q99435 816 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 C22orf23Q9BZE7 217 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 DPH1Q9BZG8 443 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 SIK2Q9H0K1 926 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 CPNE7Q9UBL6 633 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 TMX2Q9Y320 296 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 SNX14Q9Y5W7 946 aa4.24□□□□□ -1.73
TIMM9P3-201ENST00000428659 SMIM22K7EJ46 135 aa4.23□□□□□ -1.73
TIMM9P3-201ENST00000428659 TP73O15350 636 aa4.23□□□□□ -1.73
TIMM9P3-201ENST00000428659 SLC16A3O15427 465 aaKnown RBP4.23□□□□□ -1.73
TIMM9P3-201ENST00000428659 VCAM1P19320 739 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms