RNA–Protein interactions for RNA: ENST00000428479.3

GGCX-204, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-204ENST00000428479 NT5C1AQ9BXI3 368 aa13.11□□□□□ -0.31
GGCX-204ENST00000428479 B3GNT5Q9BYG0 378 aa13.11□□□□□ -0.31
GGCX-204ENST00000428479 ELOVL4Q9GZR5 314 aa13.11□□□□□ -0.31
GGCX-204ENST00000428479 WDR6Q9NNW5 1121 aaKnown RBP13.11□□□□□ -0.31
GGCX-204ENST00000428479 DNMT3BQ9UBC3 853 aaKnown RBP13.11□□□□□ -0.31
GGCX-204ENST00000428479 PRKAG3Q9UGI9 489 aa13.11□□□□□ -0.31
GGCX-204ENST00000428479 LIMA1Q9UHB6 759 aaKnown RBP13.11□□□□□ -0.31
GGCX-204ENST00000428479 GREB1Q4ZG55 1949 aa13.11□□□□□ -0.31
GGCX-204ENST00000428479 DOCK8Q8NF50 2099 aa13.11□□□□□ -0.31
GGCX-204ENST00000428479 CLUHO75153 1309 aa13.11□□□□□ -0.31
GGCX-204ENST00000428479 SPTBN5Q9NRC6 3674 aaKnown RBP13.1□□□□□ -0.31
GGCX-204ENST00000428479 CAVIN2O95810 425 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 ACO1P21399 889 aaKnown RBP13.1□□□□□ -0.31
GGCX-204ENST00000428479 BDNFP23560 247 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 PON1P27169 355 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 COPB1P53618 953 aaKnown RBP13.1□□□□□ -0.31
GGCX-204ENST00000428479 YWHAEP62258 255 aaKnown RBP13.1□□□□□ -0.31
GGCX-204ENST00000428479 RPL10AP62906 217 aaKnown RBP13.1□□□□□ -0.31
GGCX-204ENST00000428479 GCNT1Q02742 428 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 EXOC3L4Q17RC7 722 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 DPY19L2P1Q6NXN4 242 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 TRIM65Q6PJ69 517 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 VSTM1Q6UX27 236 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 RRAGAQ7L523 313 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 ADHFE1Q8IWW8 467 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 ELMOD1Q8N336 334 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 PPM1KQ8N3J5 372 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 C12orf29Q8N999 325 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 SLC4A11Q8NBS3 891 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 PSMG2Q969U7 264 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 ZNF512Q96ME7 567 aaPredicted RBP13.1□□□□□ -0.31
GGCX-204ENST00000428479 KREMEN1Q96MU8 473 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 CORO1BQ9BR76 489 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 LRRC3Q9BY71 257 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 VPS16Q9H269 839 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 CBX8Q9HC52 389 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 ASB3Q9Y575 518 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 MYH10P35580 1976 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 UNC80Q8N2C7 3258 aa13.1□□□□□ -0.31
GGCX-204ENST00000428479 LRRC10BA6NIK2 292 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 CLDN5O00501 218 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 PES1O00541 588 aaKnown RBP13.09□□□□□ -0.31
GGCX-204ENST00000428479 RHOP08100 348 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 ATP1A3P13637 1013 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 CDK11BP21127 795 aaKnown RBP13.09□□□□□ -0.31
GGCX-204ENST00000428479 GPR15P49685 360 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 CACNA2D1P54289 1103 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 RAD23BP54727 409 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 EPHA5P54756 1037 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 APBA1Q02410 837 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 ZP2Q05996 745 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 KCNMA1Q12791 1236 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 DDR2Q16832 855 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 PABPC1LQ4VXU2 614 aaKnown RBP13.09□□□□□ -0.31
GGCX-204ENST00000428479 ZNF394Q53GI3 561 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 SDHAF4Q5VUM1 108 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 IQCEQ6IPM2 695 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 APTXQ7Z2E3 356 aaKnown RBP13.09□□□□□ -0.31
GGCX-204ENST00000428479 DNAJB7Q7Z6W7 309 aaPredicted RBP13.09□□□□□ -0.31
GGCX-204ENST00000428479 FAM35AQ86V20 835 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 SCN4BQ8IWT1 228 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 HS6ST3Q8IZP7 471 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 FUKQ8N0W3 1084 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 ANKRD20A12PQ8NF67 263 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 GPR152Q8TDT2 470 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 ADAMTS19Q8TE59 1207 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 GIPC2Q8TF65 315 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 TMEM176AQ96HP8 235 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 RPGRIP1Q96KN7 1286 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 ZNF518BQ9C0D4 1074 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 SIX2Q9NPC8 291 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 AVENQ9NQS1 362 aaPredicted RBP13.09□□□□□ -0.31
GGCX-204ENST00000428479 FAM49BQ9NUQ9 324 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 TMEM30AQ9NV96 361 aa13.09□□□□□ -0.31
GGCX-204ENST00000428479 DENND4CQ5VZ89 1909 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 C19orf67A6NJJ6 358 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 BECN2A8MW95 431 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 LOC730098B7Z3J9 87 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 TPM2P07951 284 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 CCDC130P13994 396 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 TRIM21P19474 475 aaKnown RBP13.08□□□□□ -0.32
GGCX-204ENST00000428479 SP100P23497 879 aaPredicted RBP13.08□□□□□ -0.32
GGCX-204ENST00000428479 FSHRP23945 695 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 VEPH1Q14D04 833 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 SLC5A9Q2M3M2 681 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 GJB7Q6PEY0 223 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 ITIH5Q86UX2 942 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 TMC8Q8IU68 726 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 ITFG1Q8TB96 612 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 FAM200AQ8TCP9 573 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 SLC2A14Q8TDB8 520 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 C8orf48Q96LL4 319 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 NECAB3Q96P71 396 aaPredicted RBP13.08□□□□□ -0.32
GGCX-204ENST00000428479 HNRNPABQ99729 332 aaKnown RBP13.08□□□□□ -0.32
GGCX-204ENST00000428479 MED10Q9BTT4 135 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 DNAI2Q9GZS0 605 aa13.08□□□□□ -0.32
GGCX-204ENST00000428479 UBE2TQ9NPD8 197 aaPredicted RBP13.08□□□□□ -0.32
GGCX-204ENST00000428479 APEX2Q9UBZ4 518 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms