RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 PFKLP17858 780 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 ACAT1P24752 427 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 AP3M2P53677 418 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 TNNC1P63316 161 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 PSMD6Q15008 389 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 BMT2Q1RMZ1 405 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 SOWAHAQ2M3V2 549 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 RESP18Q5W5W9 173 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 MON1AQ86VX9 555 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 MAB21L3Q8N8X9 362 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 HPS3Q969F9 1004 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 MMS19Q96T76 1030 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 CGRRF1Q99675 332 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 SYT15Q9BQS2 421 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 SLC46A2Q9BY10 475 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 TMLHEQ9NVH6 421 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 MAGEC2Q9UBF1 373 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 PCDHA7Q9UN72 937 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 OTOGLQ3ZCN5 2332 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 TRAV19A0A0A6YYK7 116 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 TRIM66O15016 1216 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 PAPSS2O95340 614 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 SDHBP21912 280 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 WARSP23381 471 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 CYP2F1P24903 491 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 ANXA13P27216 316 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 ATICP31939 592 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 CNR2P34972 360 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 CYP2J2P51589 502 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 CYP24A1Q07973 514 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 EHHADHQ08426 723 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 TRPC3Q13507 836 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 PDGFRLQ15198 375 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 KNOP1Q1ED39 458 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 LMBRD2Q68DH5 695 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 FAM171BQ6P995 826 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 TRAPPC11Q7Z392 1133 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 SUMF1Q8NBK3 374 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 OR5B17Q8NGF7 314 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 SCFD1Q8WVM8 642 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 SYAP1Q96A49 352 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 SPATA17Q96L03 361 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 PKMYT1Q99640 499 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 SNX25Q9H3E2 840 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 GTSE1Q9NYZ3 720 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 GMEB2Q9UKD1 530 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 SMG5Q9UPR3 1016 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 COL4A3Q01955 1670 aa16.55■□□□□ 0.24
CTDSP1-202ENST00000428361 TGFB1I1O43294 461 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 EXOC3O60645 756 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 TACC1O75410 805 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 KIF20AO95235 890 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 STAU1O95793 577 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 USP17L7P0C7H9 530 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 SLFN14P0C7P3 912 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 PPP3CCP48454 512 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 FAM160A1Q05DH4 1040 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 GRSF1Q12849 480 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 PSMD2Q13200 908 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 DDR2Q16832 855 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 FOXD4L6Q3SYB3 417 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 FOXD4L3Q6VB84 417 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 LIMS2Q7Z4I7 341 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 OSTM1Q86WC4 334 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 SCN4BQ8IWT1 228 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 NELFCDQ8IXH7 590 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 RDH13Q8NBN7 331 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 GLIS3Q8NEA6 775 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 CCDC47Q96A33 483 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 GKN1Q9NS71 199 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 EXOC1Q9NV70 894 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 RCOR1Q9UKL0 485 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 ATP6V1DQ9Y5K8 247 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 DMDP11532 3685 aa16.54■□□□□ 0.24
CTDSP1-202ENST00000428361 ATG13O75143 517 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 PHACTR2O75167 634 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 CKMP06732 381 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 HOXD13P35453 343 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 AFMP43652 599 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 RUNX3Q13761 415 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 KCNB1Q14721 858 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 TSSK4Q6SA08 328 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 TMEM150AQ86TG1 271 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 KIAA2013Q8IYS2 634 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 CPA6Q8N4T0 437 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 CCDC26Q8TAB7 109 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 USP13Q92995 863 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 CCDC127Q96BQ5 260 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 CCDC34Q96HJ3 373 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 ZFYVE19Q96K21 471 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 LRRC3BQ96PB8 259 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 FAM83CQ9BQN1 747 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 BLZF1Q9H2G9 400 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 SLC39A2Q9NP94 309 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 SPTBN4Q9H254 2564 aa16.53■□□□□ 0.24
CTDSP1-202ENST00000428361 ATP8B3O60423 1300 aa16.52■□□□□ 0.24
CTDSP1-202ENST00000428361 PTPRJQ12913 1337 aa16.52■□□□□ 0.24
CTDSP1-202ENST00000428361 ZNF638Q14966 1978 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms