RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 AXLP30530 894 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 CETN2P41208 172 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 SOWAHAQ2M3V2 549 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 FAM102AQ5T9C2 384 aaPredicted RBP10.97□□□□□ -0.65
HDAC9-210ENST00000428307 PRUNE1Q86TP1 453 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 HAUS1Q96CS2 278 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 PIWIL1Q96J94 861 aaKnown RBP10.97□□□□□ -0.65
HDAC9-210ENST00000428307 SLITRK1Q96PX8 696 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 UBQLN1Q9UMX0 589 aaKnown RBP10.97□□□□□ -0.65
HDAC9-210ENST00000428307 IPPQ9Y573 584 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 A8MXQ7 604 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 E5RJQ4 531 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 H0YGN5 161 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 SPTLC1O15269 473 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 CAPN2P17655 700 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 IL1R2P27930 398 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 TM4SF4P48230 202 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 FCGRTP55899 365 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 PPARDQ03181 441 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 PRKCZQ05513 592 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 SOX4Q06945 474 aaPredicted RBP10.97□□□□□ -0.65
HDAC9-210ENST00000428307 ZNF268Q14587 947 aaPredicted RBP10.97□□□□□ -0.65
HDAC9-210ENST00000428307 GOLGA7BQ2TAP0 167 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 FBXO47Q5MNV8 452 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 ZNF618Q5T7W0 954 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 MFSD14CQ5VZR4 134 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 OR6B2Q6IFH4 312 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 LCLAT1Q6UWP7 414 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 FAM228AQ86W67 206 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 CCDC25Q86WR0 208 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 NME8Q8N427 588 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 SMG8Q8ND04 991 aaKnown RBP10.97□□□□□ -0.65
HDAC9-210ENST00000428307 ATL2Q8NHH9 583 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 WNT8BQ93098 351 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 RBM41Q96IZ5 413 aaKnown RBP10.97□□□□□ -0.65
HDAC9-210ENST00000428307 ZFP42Q96MM3 310 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 RUNDC3BQ96NL0 473 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 DPEP3Q9H4B8 488 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 WDR35Q9P2L0 1181 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 NFS1Q9Y697 457 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 MEIS3P2A8K0S8 358 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 KPNA7A9QM74 516 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 PFKMP08237 780 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 CYBAP13498 195 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 IBSPP21815 317 aaPredicted RBP10.96□□□□□ -0.65
HDAC9-210ENST00000428307 LMO2P25791 158 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 CALCOCO2Q13137 446 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 TAF5Q15542 800 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 CCNG2Q16589 344 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 SH3PXD2AQ5TCZ1 1133 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 LRRC38Q5VT99 294 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 GDF6Q6KF10 455 aaPredicted RBP10.96□□□□□ -0.65
HDAC9-210ENST00000428307 PMF1Q6P1K2 205 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 TAF2Q6P1X5 1199 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 SPOCD1Q6ZMY3 1216 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 LRRC52Q8N7C0 313 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 NIPA2Q8N8Q9 360 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 MTG1Q9BT17 334 aaPredicted RBP10.96□□□□□ -0.65
HDAC9-210ENST00000428307 BCCIPQ9P287 314 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDAC9-210ENST00000428307 SAE1Q9UBE0 346 aaPredicted RBP10.96□□□□□ -0.65
HDAC9-210ENST00000428307 KIAA1257Q9ULG3 409 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 CDY2AQ9Y6F7 541 aa10.96□□□□□ -0.65
HDAC9-210ENST00000428307 GOLGA6L10A6NI86 522 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 PPFIA2O75334 1257 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 TJP3O95049 919 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 GAS8O95995 478 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 HOXC8P31273 242 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 ADCY8P40145 1251 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 PMS2P54278 862 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 GJA9P57773 515 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 DYNLT1P63172 113 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 CAP1Q01518 475 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 PDE4CQ08493 712 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 ZNF844Q08AG5 666 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 MTMR3Q13615 1198 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 TTC19Q6DKK2 380 aaPredicted RBP10.96□□□□□ -0.66
HDAC9-210ENST00000428307 GSTA5Q7RTV2 222 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 TTC30AQ86WT1 665 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 SCUBE3Q8IX30 993 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 TTC39CQ8N584 583 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 UHMK1Q8TAS1 419 aaKnown RBP10.96□□□□□ -0.66
HDAC9-210ENST00000428307 IPO4Q8TEX9 1081 aaKnown RBP10.96□□□□□ -0.66
HDAC9-210ENST00000428307 SLCO2A1Q92959 643 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 SEMA4AQ9H3S1 761 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 SPC25Q9HBM1 224 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 LRRC4CQ9HCJ2 640 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 CACNG4Q9UBN1 327 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 MTRF1LQ9UGC7 380 aaKnown RBP10.96□□□□□ -0.66
HDAC9-210ENST00000428307 GTF2IRD1Q9UHL9 959 aa10.96□□□□□ -0.66
HDAC9-210ENST00000428307 FEZ2Q9UHY8 353 aaPredicted RBP10.96□□□□□ -0.66
HDAC9-210ENST00000428307 M0QZ92 97 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 PIRO00625 290 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 CD4P01730 458 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 MYZAPP0CAP1 466 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 RARBP10826 455 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 FGFR1P11362 822 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 ELNP15502 786 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 IGFBP6P24592 240 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 GABRB2P47870 512 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 ATP1A2P50993 1020 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms