RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CCDC127Q96BQ5 260 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 SHDQ96IW2 340 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 C8orf48Q96LL4 319 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 ASB16Q96NS5 453 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 NELL2Q99435 816 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 IER2Q9BTL4 223 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 TTLL2Q9BWV7 592 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 APOL5Q9BWW9 433 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 BCO2Q9BYV7 579 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 ELOVL4Q9GZR5 314 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 KIF9Q9HAQ2 790 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 PNPLA8Q9NP80 782 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 HCN4Q9Y3Q4 1203 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 TIMM13Q9Y5L4 95 aaPredicted RBP9.77□□□□□ -0.85
SMC1A-203ENST00000428014 PTPRDP23468 1912 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 FAM92AA1XBS5 289 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 MOSPD3O75425 235 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 FGFR1OPO95684 399 aaKnown RBP9.76□□□□□ -0.85
SMC1A-203ENST00000428014 GNL1P36915 607 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-203ENST00000428014 STARD6P59095 220 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 FCHO2Q0JRZ9 810 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 ZNF699Q32M78 642 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 ARHGAP15Q53QZ3 475 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 C1orf220Q5T0J3 134 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 GET4Q7L5D6 327 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-203ENST00000428014 SUGP1Q8IWZ8 645 aaKnown RBP9.76□□□□□ -0.85
SMC1A-203ENST00000428014 RDH13Q8NBN7 331 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 ATAD1Q8NBU5 361 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 CCDC150Q8NCX0 1101 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 PLEKHO2Q8TD55 490 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 JAKMIP2Q96AA8 810 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 CHAMP1Q96JM3 812 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 FAM81BQ96LP2 452 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 SYT15Q9BQS2 421 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 DDX23Q9BUQ8 820 aaKnown RBP9.76□□□□□ -0.85
SMC1A-203ENST00000428014 CRISPLD1Q9H336 500 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 TASP1Q9H6P5 420 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 ZFP14Q9HCL3 533 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 KIAA1468Q9P260 1216 aa9.76□□□□□ -0.85
SMC1A-203ENST00000428014 PHACTR2O75167 634 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 VNN1O95497 513 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 WEE2P0C1S8 567 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 HOXB1P14653 301 aaPredicted RBP9.75□□□□□ -0.85
SMC1A-203ENST00000428014 HMGA1P17096 107 aaKnown RBP9.75□□□□□ -0.85
SMC1A-203ENST00000428014 ATF6P18850 670 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 CASP4P49662 377 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 TUBP50607 506 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 ARPP19P56211 112 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 MYL6P60660 151 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 SLC5A9Q2M3M2 681 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 SNX30Q5VWJ9 437 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 CEP135Q66GS9 1140 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 TTI2Q6NXR4 508 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 GAREM2Q75VX8 874 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 SPATA2LQ8IUW3 424 aaPredicted RBP9.75□□□□□ -0.85
SMC1A-203ENST00000428014 MFSD6LQ8IWD5 586 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 ZNF276Q8N554 614 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 MLKLQ8NB16 471 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 FBXL13Q8NEE6 735 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 ITFG1Q8TB96 612 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 IRF7Q92985 503 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 PBXIP1Q96AQ6 731 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 GCNAQ96QF7 691 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 CORO1BQ9BR76 489 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 SNX25Q9H3E2 840 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 CSNK1G1Q9HCP0 422 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 IL37Q9NZH6 218 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 MAGEC2Q9UBF1 373 aaPredicted RBP9.75□□□□□ -0.85
SMC1A-203ENST00000428014 ARMCX3Q9UH62 379 aaPredicted RBP9.75□□□□□ -0.85
SMC1A-203ENST00000428014 CDH22Q9UJ99 828 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 NUMBLQ9Y6R0 609 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 DENND4CQ5VZ89 1909 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 ATP8B3O60423 1300 aa9.75□□□□□ -0.85
SMC1A-203ENST00000428014 NUP210Q8TEM1 1887 aaPredicted RBP9.74□□□□□ -0.85
SMC1A-203ENST00000428014 CHADO15335 359 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 RTN3O95197 1032 aaPredicted RBP9.74□□□□□ -0.85
SMC1A-203ENST00000428014 F11P03951 625 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 OR4Q2P0C623 313 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 PSMC3P17980 439 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 PTPN1P18031 435 aaKnown RBP9.74□□□□□ -0.85
SMC1A-203ENST00000428014 AOC1P19801 751 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 FCARP24071 287 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 TBXAS1P24557 533 aaPredicted RBP9.74□□□□□ -0.85
SMC1A-203ENST00000428014 MXI1P50539 228 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 YWHAEP62258 255 aaKnown RBP9.74□□□□□ -0.85
SMC1A-203ENST00000428014 CETN1Q12798 172 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 BIRC3Q13489 604 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 MEA1Q16626 185 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 MGAT5BQ3V5L5 792 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 HFE2Q6ZVN8 426 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 OSTM1Q86WC4 334 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 B3GALNT2Q8NCR0 500 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 PDZD8Q8NEN9 1154 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 SHKBP1Q8TBC3 707 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 FGF14Q92915 247 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 SLC35C1Q96A29 364 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 PCED1BQ96HM7 432 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 GBP4Q96PP9 640 aa9.74□□□□□ -0.85
SMC1A-203ENST00000428014 TMEM209Q96SK2 561 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms