RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 C6orf118Q5T5N4 469 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ARL6IP4Q66PJ3 421 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 CYP4Z1Q86W10 505 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 DSELQ8IZU8 1212 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 TRIML2Q8N7C3 387 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.97□□□□□ -1.45
HERC4-206ENST00000427635 ZMYND12Q9H0C1 365 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 INTS2Q9H0H0 1204 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 ACAD8Q9UKU7 415 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 MORC2Q9Y6X9 1032 aaPredicted RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 NCAPD2Q15021 1401 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 TNS3Q68CZ2 1445 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 A0A087X0T9 212 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 PRSS47A8MTI9 375 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 MYO1GB0I1T2 1018 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 FOXN3O00409 490 aaPredicted RBP5.96□□□□□ -1.45
HERC4-206ENST00000427635 CYP27B1O15528 508 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 GAS2O43903 313 aaKnown RBP5.96□□□□□ -1.45
HERC4-206ENST00000427635 SPAG7O75391 227 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 SKAP2O75563 359 aaPredicted RBP5.96□□□□□ -1.45
HERC4-206ENST00000427635 DGAT1O75907 488 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 KITP10721 976 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 FGFR1P11362 822 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 IL2P60568 153 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 GNA13Q14344 377 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 NFIXQ14938 502 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 EMC2Q15006 297 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 TCEA2Q15560 299 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 RASIP1Q5U651 963 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 PLA2G4FQ68DD2 849 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 APOA5Q6Q788 366 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 USP7Q93009 1102 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 KLHL29Q96CT2 875 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 CNDP2Q96KP4 475 aaKnown RBP5.96□□□□□ -1.45
HERC4-206ENST00000427635 NT5C1AQ9BXI3 368 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 PTPRHQ9HD43 1115 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 TRMT6Q9UJA5 497 aaKnown RBP5.96□□□□□ -1.45
HERC4-206ENST00000427635 MYO5CQ9NQX4 1742 aa5.96□□□□□ -1.45
HERC4-206ENST00000427635 STX7O15400 261 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 FKBP9O95302 570 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 RHOCP08134 193 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 NCAM1P13591 858 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 POLR2EP19388 210 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 ELOAQ14241 798 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 INPP5AQ14642 412 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 ACOX1Q15067 660 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 LLGL1Q15334 1064 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 SH3D19Q5HYK7 790 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 MAMSTRQ6ZN01 415 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 FKBP9P1Q75LS8 142 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 NECAB2Q7Z6G3 386 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 REM2Q8IYK8 340 aaPredicted RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 ZNF564Q8TBZ8 553 aaPredicted RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 SUSD6Q92537 303 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 BTBD6Q96KE9 485 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 DEFB129Q9H1M3 183 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 UVRAGQ9P2Y5 699 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 COQ6Q9Y2Z9 468 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 CPDO75976 1380 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 KCNN4O15554 427 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 TEX33O43247 280 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 MAN1A2O60476 641 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 GARTP22102 1010 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 CCNE1P24864 410 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 USP11P51784 963 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 CCSAPQ6IQ19 270 aaPredicted RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 UNC45BQ8IWX7 931 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 PROM2Q8N271 834 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 ZSCAN1Q8NBB4 408 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 TMEM143Q96AN5 459 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 ZFYVE1Q9HBF4 777 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 RIC8BQ9NVN3 520 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 CYP39A1Q9NYL5 469 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 PPARGC1AQ9UBK2 798 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 EVPLLA8MZ36 301 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 MIF4GDA9UHW6 222 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 M0R3G1 203 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 RTCAO00442 366 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 MTRF1O75570 445 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 ANXA5P08758 320 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 RANBP1P43487 201 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 RENBPP51606 427 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 INHBEP58166 350 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 GRM4Q14833 912 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 INO80DQ53TQ3 878 aaPredicted RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 C11orf74Q86VG3 221 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 NUDCD3Q8IVD9 361 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 CDK20Q8IZL9 346 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 SYT2Q8N9I0 419 aaPredicted RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 ATP11CQ8NB49 1132 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 CXorf40AQ8TE69 158 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 FAM151AQ8WW52 585 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 TMEM47Q9BQJ4 181 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 MRPL17Q9NRX2 175 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 VPS28Q9UK41 221 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 UBQLN1Q9UMX0 589 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 PPP2R2CQ9Y2T4 447 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 CHURC1-FNTBB4DL54 471 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 POLRMTO00411 1230 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 TLL1O43897 1013 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms