RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 SLC46A2Q9BY10 475 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 GPR88Q9GZN0 384 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 SLITRK6Q9H5Y7 841 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 HEBP1Q9NRV9 189 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 TMEM30AQ9NV96 361 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 NXF1Q9UBU9 619 aaKnown RBP20.49■□□□□ 0.87
COL9A2-204ENST00000427563 PCDHA5Q9Y5H7 936 aa20.49■□□□□ 0.87
COL9A2-204ENST00000427563 PATJQ8NI35 1801 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 SLC38A8A6NNN8 435 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 MAPK13O15264 365 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 PHACTR2O75167 634 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 NOL4O94818 638 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 FAM163BP0C2L3 166 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 TRIM49P0CI25 452 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 TRIM49CP0CI26 452 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 PSMC3P17980 439 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 GNL1P36915 607 aaPredicted RBP20.48■□□□□ 0.87
COL9A2-204ENST00000427563 PRCPP42785 496 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 MAGEA11P43364 429 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 AP3M2P53677 418 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 CACNA2D1P54289 1103 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 MCCD1P59942 119 aaPredicted RBP20.48■□□□□ 0.87
COL9A2-204ENST00000427563 PFKPQ01813 784 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 PPP3CAQ08209 521 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 BIRC3Q13489 604 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 SPATA2LQ8IUW3 424 aaPredicted RBP20.48■□□□□ 0.87
COL9A2-204ENST00000427563 MFSD6LQ8IWD5 586 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 DTWD2Q8NBA8 298 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 PJA1Q8NG27 643 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 SYAP1Q96A49 352 aaPredicted RBP20.48■□□□□ 0.87
COL9A2-204ENST00000427563 PCED1BQ96HM7 432 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 TRMT61BQ9BVS5 477 aaKnown RBP20.48■□□□□ 0.87
COL9A2-204ENST00000427563 SMG9Q9H0W8 520 aaKnown RBP20.48■□□□□ 0.87
COL9A2-204ENST00000427563 TASP1Q9H6P5 420 aa20.48■□□□□ 0.87
COL9A2-204ENST00000427563 STK25O00506 426 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 KIF20AO95235 890 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 FGF19O95750 216 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 BDNFP23560 247 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 WEE1P30291 646 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 CDC25CP30307 473 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 GDI1P31150 447 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 VAMP7P51809 220 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 PMS1P54277 932 aaKnown RBP20.47■□□□□ 0.87
COL9A2-204ENST00000427563 TNNC1P63316 161 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 PRKCQQ04759 706 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 ZNF699Q32M78 642 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 MDH1BQ5I0G3 518 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 SPOPLQ6IQ16 392 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 ZNF687Q8N1G0 1237 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 OR6B3Q8NGW1 331 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 RIN3Q8TB24 985 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 MYCBPAPQ8TBZ2 947 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 DEPDC1BQ8WUY9 529 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 DNASE1L2Q92874 299 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 EEF2KMTQ96G04 330 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 MYRFLQ96LU7 910 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 TIGD1Q96MW7 591 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 MAGED2Q9UNF1 606 aaPredicted RBP20.47■□□□□ 0.87
COL9A2-204ENST00000427563 FRMD4BQ9Y2L6 1034 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 USP34Q70CQ2 3546 aa20.47■□□□□ 0.87
COL9A2-204ENST00000427563 F5P12259 2224 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 PIEZO1Q92508 2521 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 KANSL1LA0AUZ9 987 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 GOLGA6L4A6NEF3 574 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 CSH1P0DML2 217 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 CSH2P0DML3 217 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 PTPN1P18031 435 aaKnown RBP20.46■□□□□ 0.87
COL9A2-204ENST00000427563 RPL10AP62906 217 aaKnown RBP20.46■□□□□ 0.87
COL9A2-204ENST00000427563 FCHO2Q0JRZ9 810 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 FZD5Q13467 585 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 COBLL1Q53SF7 1204 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 SCARA5Q6ZMJ2 495 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 TPRG1Q6ZUI0 275 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 SCN4BQ8IWT1 228 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 FAM186BQ8IYM0 893 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 TRMT2BQ96GJ1 504 aaKnown RBP20.46■□□□□ 0.87
COL9A2-204ENST00000427563 GSDMAQ96QA5 445 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 SNX25Q9H3E2 840 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 BRD9Q9H8M2 597 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 MAGEC2Q9UBF1 373 aaPredicted RBP20.46■□□□□ 0.87
COL9A2-204ENST00000427563 SIT1Q9Y3P8 196 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 CACNA1IQ9P0X4 2223 aa20.46■□□□□ 0.87
COL9A2-204ENST00000427563 VPS13AQ96RL7 3174 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 CLDN5O00501 218 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 IKBKBO14920 756 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 HLA-DRAP01903 254 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 TARSP26639 723 aaKnown RBP20.45■□□□□ 0.86
COL9A2-204ENST00000427563 USP46P62068 366 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 CYP27A1Q02318 531 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 ADAM9Q13443 819 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 EDRF1Q3B7T1 1238 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 ARHGAP15Q53QZ3 475 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 ZNF667Q5HYK9 610 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 ZNF658Q5TYW1 1059 aaPredicted RBP20.45■□□□□ 0.86
COL9A2-204ENST00000427563 TXNDC8Q6A555 127 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 C4orf50Q6ZRC1 276 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 ZC3H3Q8IXZ2 948 aaKnown RBP20.45■□□□□ 0.86
COL9A2-204ENST00000427563 B3GNT5Q9BYG0 378 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 APOBEC3GQ9HC16 384 aaKnown RBP20.45■□□□□ 0.86
COL9A2-204ENST00000427563 LTB4R2Q9NPC1 389 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms