RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 HPCAP84074 193 aa13.71□□□□□ -0.22
SPG11-202ENST00000427534 LRRC37BQ96QE4 947 aa13.71□□□□□ -0.22
SPG11-202ENST00000427534 CST8O60676 142 aa13.71□□□□□ -0.22
SPG11-202ENST00000427534 EGFRP00533 1210 aa13.71□□□□□ -0.22
SPG11-202ENST00000427534 ERVK-10P10266 1014 aa13.71□□□□□ -0.22
SPG11-202ENST00000427534 MOB2Q70IA6 237 aa13.71□□□□□ -0.22
SPG11-202ENST00000427534 DDX42Q86XP3 938 aaKnown RBP eCLIP13.71□□□□□ -0.22
SPG11-202ENST00000427534 MTFMTQ96DP5 389 aaKnown RBP13.71□□□□□ -0.22
SPG11-202ENST00000427534 SPATA16Q9BXB7 569 aa13.71□□□□□ -0.22
SPG11-202ENST00000427534 TUT1Q9H6E5 874 aaKnown RBP13.71□□□□□ -0.22
SPG11-202ENST00000427534 MRFAP1Q9Y605 127 aa13.71□□□□□ -0.22
SPG11-202ENST00000427534 A0A1B0GTH6 734 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 UBXN8O00124 270 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 CPSF4O95639 269 aaKnown RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 FGFR2P21802 821 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 STYK1Q6J9G0 422 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 IL25Q9H293 177 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 NYAP2Q9P242 653 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 SRP72O76094 671 aaKnown RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 SPATA31D3P0C874 917 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 MYL2P10916 166 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 ALDH9A1P49189 494 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 CLEC16AQ2KHT3 1053 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 TKFCQ3LXA3 575 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 BTNL9Q6UXG8 535 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 SPATA31D4Q6ZUB0 917 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 OTOAQ7RTW8 1153 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 CLEC4FQ8N1N0 589 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 MYOCQ99972 504 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 TRABDQ9H4I3 376 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 SNX8Q9Y5X2 465 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 TRDMT1O14717 391 aaKnown RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 EXTL3O43909 919 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 LUC7L3O95232 432 aaKnown RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 FDPSP14324 419 aaKnown RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 CAV1Q03135 178 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 PTGISQ16647 500 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 RDM1Q8NG50 284 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 WNK4Q96J92 1243 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 ACTR5Q9H9F9 607 aaPredicted RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 ZC4H2Q9NQZ6 224 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 MCM8Q9UJA3 840 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 NEU2Q9Y3R4 380 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 CEP152O94986 1710 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 PLD1Q13393 1074 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 ENOSF1Q7L5Y1 443 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 TXNRD3Q86VQ6 643 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 RCOR2Q8IZ40 523 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 RFFLQ8WZ73 363 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 MRPS31Q92665 395 aaKnown RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 C7orf25Q9BPX7 421 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 DDTLA6NHG4 134 aaPredicted RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 SLC16A3O15427 465 aaKnown RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 MSH4O15457 936 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 STAG3L1P0CL83 205 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 GYS1P13807 737 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 COMTP21964 271 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 PCSK1P29120 753 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 CHI3L1P36222 383 aaPredicted RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 BTG3Q14201 252 aaPredicted RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 POLD3Q15054 466 aaPredicted RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 KCTD19Q17RG1 926 aaPredicted RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 C3orf62Q6ZUJ4 267 aa13.7□□□□□ -0.22
SPG11-202ENST00000427534 ZNF669Q96BR6 464 aaPredicted RBP13.7□□□□□ -0.22
SPG11-202ENST00000427534 MAGEB2O15479 319 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 CYP2C19P33261 490 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 ATG4AQ8WYN0 398 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 SEMA4DQ92854 862 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 OTUB1Q96FW1 271 aaPredicted RBP13.69□□□□□ -0.22
SPG11-202ENST00000427534 PCDHB12Q9Y5F1 795 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 CLTCQ00610 1675 aaKnown RBP13.69□□□□□ -0.22
SPG11-202ENST00000427534 MT-CO1P00395 513 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 KRT4P19013 534 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 TMEM132BQ14DG7 1078 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 PURBQ96QR8 312 aaKnown RBP13.69□□□□□ -0.22
SPG11-202ENST00000427534 FAM32AQ9Y421 112 aaKnown RBP13.69□□□□□ -0.22
SPG11-202ENST00000427534 KDM6AO15550 1401 aaPredicted RBP13.69□□□□□ -0.22
SPG11-202ENST00000427534 STAU1O95793 577 aaKnown RBP13.69□□□□□ -0.22
SPG11-202ENST00000427534 SLC11A2P49281 568 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 PTK7Q13308 1070 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 KYAT1Q16773 422 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 CCDC142Q17RM4 750 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 FAM171A1Q5VUB5 890 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 RHBGQ9H310 441 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 PDS5AQ29RF7 1337 aaKnown RBP13.69□□□□□ -0.22
SPG11-202ENST00000427534 MLNP12872 115 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 CAP2P40123 477 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 PPP2R2AP63151 447 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 ANKRD49Q8WVL7 239 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 ARHGEF26Q96DR7 871 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 VPS50Q96JG6 964 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 CAMSAP1Q5T5Y3 1602 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 LOC100653049A0A140TA62 436 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 KRT34O76011 436 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 UCHL3P15374 230 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 ALOX15P16050 662 aaPredicted RBP13.69□□□□□ -0.22
SPG11-202ENST00000427534 TNNI3P19429 210 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 PHKG1Q16816 387 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 NOL9Q5SY16 702 aaKnown RBP13.69□□□□□ -0.22
SPG11-202ENST00000427534 NT5MQ9NPB1 228 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms