RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 CXorf38Q8TB03 319 aa10.97□□□□□ -0.65
HDLBP-213ENST00000427007 LEO1Q8WVC0 666 aaPredicted RBP10.97□□□□□ -0.65
HDLBP-213ENST00000427007 USP28Q96RU2 1077 aa10.97□□□□□ -0.65
HDLBP-213ENST00000427007 PKMYT1Q99640 499 aa10.97□□□□□ -0.65
HDLBP-213ENST00000427007 KIF9Q9HAQ2 790 aa10.97□□□□□ -0.65
HDLBP-213ENST00000427007 TRPC7Q9HCX4 862 aa10.97□□□□□ -0.65
HDLBP-213ENST00000427007 POLR3BQ9NW08 1133 aaPredicted RBP10.97□□□□□ -0.65
HDLBP-213ENST00000427007 SIX4Q9UIU6 781 aa10.97□□□□□ -0.65
HDLBP-213ENST00000427007 ZMYM5Q9UJ78 669 aa10.97□□□□□ -0.65
HDLBP-213ENST00000427007 ITGA11Q9UKX5 1188 aa10.97□□□□□ -0.65
HDLBP-213ENST00000427007 EML5Q05BV3 1969 aa10.97□□□□□ -0.65
HDLBP-213ENST00000427007 RALGAPA1Q6GYQ0 2036 aa10.97□□□□□ -0.65
HDLBP-213ENST00000427007 CEP250Q9BV73 2442 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 HELZP42694 1942 aaKnown RBP10.96□□□□□ -0.65
HDLBP-213ENST00000427007 ANAPC1Q9H1A4 1944 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 MYO16Q9Y6X6 1858 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 PTPRJQ12913 1337 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 FRMD3A2A2Y4 597 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 AXIN1O15169 862 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 LRP3O75074 770 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 RNF40O75150 1001 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 NOL4O94818 638 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 EGFP01133 1207 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 RPL10AP62906 217 aaKnown RBP10.96□□□□□ -0.65
HDLBP-213ENST00000427007 RBP5P82980 135 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 GRSF1Q12849 480 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDLBP-213ENST00000427007 ALCAMQ13740 583 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 MTF1Q14872 753 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 CCDC6Q16204 474 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 CSRP2Q16527 193 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 TMEM196Q5HYL7 178 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 MON1AQ86VX9 555 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 SPATA2LQ8IUW3 424 aaPredicted RBP10.96□□□□□ -0.65
HDLBP-213ENST00000427007 TMEM86AQ8N2M4 240 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 GPD1LQ8N335 351 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 GLIS3Q8NEA6 775 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 NETO1Q8TDF5 533 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 HPS3Q969F9 1004 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 CNTNAP3BQ96NU0 1288 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 SLC22A12Q96S37 553 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 CYP2S1Q96SQ9 504 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 CNTNAP3Q9BZ76 1288 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 TMEM206Q9H813 350 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 FBRSL1Q9HCM7 1045 aaKnown RBP10.96□□□□□ -0.65
HDLBP-213ENST00000427007 GDAP2Q9NXN4 497 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 UXTQ9UBK9 157 aaPredicted RBP10.96□□□□□ -0.65
HDLBP-213ENST00000427007 SLC8A2Q9UPR5 921 aa10.96□□□□□ -0.65
HDLBP-213ENST00000427007 GREB1Q4ZG55 1949 aa10.96□□□□□ -0.66
HDLBP-213ENST00000427007 TRDMT1O14717 391 aaKnown RBP10.95□□□□□ -0.66
HDLBP-213ENST00000427007 GABRDO14764 452 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 ATP2C2O75185 946 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 CKMP06732 381 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 CCDC192P0DO97 292 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 KCNA4P22459 653 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 GJA4P35212 333 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 LHX1P48742 406 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 GALK1P51570 392 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 PSMC1P62191 440 aaKnown RBP10.95□□□□□ -0.66
HDLBP-213ENST00000427007 SLC39A14Q15043 492 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 SOWAHAQ2M3V2 549 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 CCDC65Q8IXS2 484 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 TOP6BLQ8N6T0 577 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 ARL14EPQ8N8R7 260 aaPredicted RBP10.95□□□□□ -0.66
HDLBP-213ENST00000427007 OR5B17Q8NGF7 314 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 TRMT2BQ96GJ1 504 aaKnown RBP10.95□□□□□ -0.66
HDLBP-213ENST00000427007 ANKRD36BP1Q96IX9 119 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 HHIPQ96QV1 700 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 ARRDC1-AS1Q9H2J1 176 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 ABCB6Q9NP58 842 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 INTS13Q9NVM9 706 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 DUS2Q9NX74 493 aaKnown RBP10.95□□□□□ -0.66
HDLBP-213ENST00000427007 MTMR6Q9Y217 621 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 R3HCC1Q9Y3T6 440 aaKnown RBP10.95□□□□□ -0.66
HDLBP-213ENST00000427007 WNT6Q9Y6F9 365 aa10.95□□□□□ -0.66
HDLBP-213ENST00000427007 ATG2BQ96BY7 2078 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 TRAV19A0A0A6YYK7 116 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 C2orf78A6NCI8 922 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 SLC30A4O14863 429 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 ATG13O75143 517 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 RPP40O75818 363 aaKnown RBP10.94□□□□□ -0.66
HDLBP-213ENST00000427007 USP17L7P0C7H9 530 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 LMO2P25791 158 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 PCSK1P29120 753 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 HOXA6P31267 233 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 IFNAR2P48551 515 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 AMPD2Q01433 879 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 FAM160A1Q05DH4 1040 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 MYO1EQ12965 1108 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 USP4Q13107 963 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 PSMD2Q13200 908 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 ZNF268Q14587 947 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-213ENST00000427007 PDGFRLQ15198 375 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 STK38Q15208 465 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 SF3A2Q15428 464 aaKnown RBP10.94□□□□□ -0.66
HDLBP-213ENST00000427007 ZNF77Q15935 545 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 CFAP221Q4G0U5 840 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 AASDHQ4L235 1098 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-213ENST00000427007 PPM1JQ5JR12 505 aa10.94□□□□□ -0.66
HDLBP-213ENST00000427007 KBTBD6Q86V97 674 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms