RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 WDR44Q5JSH3 913 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 POTEHQ6S545 545 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 SHKBP1Q8TBC3 707 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 TNIP3Q96KP6 325 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 MED15Q96RN5 788 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 C1QTNF1Q9BXJ1 281 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 SMOC2Q9H3U7 446 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 CYP3A43Q9HB55 503 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 GDE1Q9NZC3 331 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 DACH1Q9UI36 760 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 COQ4Q9Y3A0 265 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 NUMBLQ9Y6R0 609 aa19.22■□□□□ 0.67
HERC3-205ENST00000426683 A0A1W2PRU2 124 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 ANHXE9PGG2 379 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 CCDC192P0DO97 292 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 GABRR2P28476 465 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 FMO5P49326 533 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 MARSP56192 900 aaKnown RBP19.21■□□□□ 0.67
HERC3-205ENST00000426683 TDGQ13569 410 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 HTR4Q13639 388 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 TEAD2Q15562 447 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 PARM1Q6UWI2 310 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 VSTM1Q6UX27 236 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 UNC93AQ86WB7 457 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 STKLD1Q8NE28 680 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 FGF14Q92915 247 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 NXPE3Q969Y0 559 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 NOTCH4Q99466 2003 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 HMGXB4Q9UGU5 601 aa19.21■□□□□ 0.67
HERC3-205ENST00000426683 DOCK6Q96HP0 2047 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 FAM86C2PA6NEL3 165 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 CSH1P0DML2 217 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 CSH2P0DML3 217 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 CD58P19256 250 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 GRIK1P39086 918 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 ORC1Q13415 861 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 RBM43Q6ZSC3 357 aaKnown RBP19.2■□□□□ 0.66
HERC3-205ENST00000426683 MTSS1LQ765P7 747 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 ACOT1Q86TX2 421 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 TRIM59Q8IWR1 403 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 UBALD2Q8IYN6 164 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 TATDN2Q93075 761 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 FAXDC2Q96IV6 333 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 B3GNT5Q9BYG0 378 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 ZNF518BQ9C0D4 1074 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 ATXN3LQ9H3M9 355 aa19.2■□□□□ 0.66
HERC3-205ENST00000426683 MAGED2Q9UNF1 606 aaPredicted RBP19.2■□□□□ 0.66
HERC3-205ENST00000426683 BDP1A6H8Y1 2624 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 SLC38A8A6NNN8 435 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 CLDN5O00501 218 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 FGF19O95750 216 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 HMGA1P17096 107 aaKnown RBP19.19■□□□□ 0.66
HERC3-205ENST00000426683 ANXA13P27216 316 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 INCA1Q0VD86 236 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 TPD52L1Q16890 204 aaPredicted RBP19.19■□□□□ 0.66
HERC3-205ENST00000426683 TRIM67Q6ZTA4 783 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 GAREM2Q75VX8 874 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 CREBRFQ8IUR6 639 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 SLC44A3Q8N4M1 653 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 CNOT6LQ96LI5 555 aaKnown RBP19.19■□□□□ 0.66
HERC3-205ENST00000426683 MED10Q9BTT4 135 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 RPP25Q9BUL9 199 aaKnown RBP19.19■□□□□ 0.66
HERC3-205ENST00000426683 ELOVL4Q9GZR5 314 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 IL21Q9HBE4 155 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 C11orf16Q9NQ32 467 aa19.19■□□□□ 0.66
HERC3-205ENST00000426683 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.19■□□□□ 0.66
HERC3-205ENST00000426683 TRIM66O15016 1216 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 PMM2O15305 246 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 NARSO43776 548 aaKnown RBP19.18■□□□□ 0.66
HERC3-205ENST00000426683 GPR37L1O60883 481 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 NOL4O94818 638 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 AFPP02771 609 aaKnown RBP19.18■□□□□ 0.66
HERC3-205ENST00000426683 ERCC5P28715 1186 aaPredicted RBP19.18■□□□□ 0.66
HERC3-205ENST00000426683 CDC25CP30307 473 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 SIGLEC14Q08ET2 396 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 KCNH2Q12809 1159 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 TMEM31Q5JXX7 168 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 CRYBG2Q8N1P7 616 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 ZSWIM3Q96MP5 696 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 GCNAQ96QF7 691 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 TWNKQ96RR1 684 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 NT5C1AQ9BXI3 368 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 GPR88Q9GZN0 384 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 SLITRK6Q9H5Y7 841 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 DUSP12Q9UNI6 340 aa19.18■□□□□ 0.66
HERC3-205ENST00000426683 DOCK8Q8NF50 2099 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 F8VP50 259 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 P4HA2O15460 535 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 CILPO75339 1184 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 TRIM21P19474 475 aaKnown RBP19.17■□□□□ 0.66
HERC3-205ENST00000426683 CACNA2D1P54289 1103 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 CYP4F8P98187 520 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 CETN1Q12798 172 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 LRMPQ12912 555 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 ARHGAP15Q53QZ3 475 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 FAM78AQ5JUQ0 283 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 STXBP5Q5T5C0 1151 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 CCDC183Q5T5S1 534 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 FAM35AQ86V20 835 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 ZSCAN18Q8TBC5 510 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms