RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 FOXR2Q6PJQ5 311 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 NLRP9Q7RTR0 991 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 PGBD3Q8N328 593 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 MMGT1Q8N4V1 131 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 METTL5Q9NRN9 209 aaKnown RBP10.6□□□□□ -0.71
SP1-202ENST00000426431 GRID1Q9ULK0 1009 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 EPHB2P29323 1055 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 RARRES1P49788 294 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 ADCY1Q08828 1119 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 MED21Q13503 144 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 TNIP2Q8NFZ5 429 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 ZBTB9Q96C00 473 aa10.6□□□□□ -0.71
SP1-202ENST00000426431 CST8O60676 142 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 TWF1Q12792 350 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 HIST2H2ACQ16777 129 aaPredicted RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 HIST2H2AA3Q6FI13 130 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 SLFN11Q7Z7L1 901 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 TC2NQ8N9U0 490 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 TGS1Q96RS0 853 aaKnown RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 GIMAP4Q9NUV9 329 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 CYP2C18P33260 490 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 SESN2P58004 480 aaPredicted RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 PTPN11Q06124 597 aaPredicted RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 TTC39BQ5VTQ0 682 aaPredicted RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 TTI2Q6NXR4 508 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 VPS37AQ8NEZ2 397 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 EXD1Q8NHP7 514 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 SLC20A1Q8WUM9 679 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 UBE2OQ9C0C9 1292 aaKnown RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 TRABDQ9H4I3 376 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 FBXL5Q9UKA1 691 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 MED1Q15648 1581 aaPredicted RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 GYPCP04921 128 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 KCNA2P16389 499 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 ANXA11P50995 505 aaKnown RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 PABPC1LQ4VXU2 614 aaKnown RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 TFDP3Q5H9I0 405 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 FBXO38Q6PIJ6 1188 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 BTNL9Q6UXG8 535 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 RBM43Q6ZSC3 357 aaKnown RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 BRSK2Q8IWQ3 736 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 P2RX7Q99572 595 aaKnown RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 PRPF18Q99633 342 aaKnown RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 ZSWIM1Q9BR11 485 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 STOML1Q9UBI4 398 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 AMACRQ9UHK6 382 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 M0QYT0 321 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 STX7O15400 261 aaKnown RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 NCK2O43639 380 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 ZNF268Q14587 947 aaPredicted RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 KIZQ2M2Z5 673 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 OTOP1Q7RTM1 612 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 PLPPR4Q7Z2D5 763 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 CMTM5Q96DZ9 223 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 ERP44Q9BS26 406 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 FAM167BQ9BTA0 163 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 MTMR12Q9C0I1 747 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 NDEL1Q9GZM8 345 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 KLHL11Q9NVR0 708 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 ATRNO75882 1429 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 CYP3A7-CYP3A51PA0A087WV96 503 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 MAGEB16A2A368 324 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 EIF3HO15372 352 aaKnown RBP eCLIP10.59□□□□□ -0.712e-7■■■■□ 23.4
SP1-202ENST00000426431 CYP3A7P24462 503 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 BRD2P25440 801 aaKnown RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 RTP1P59025 263 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 ITGA9Q13797 1035 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 CYFIP2Q96F07 1278 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 SMARCD1Q96GM5 515 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 APBA2Q99767 749 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 ADGRE3Q9BY15 652 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 AGPAT5Q9NUQ2 364 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 PKD2L2Q9NZM6 624 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 CDY2AQ9Y6F7 541 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 CDY1Q9Y6F8 540 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 COL1A2P08123 1366 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 TRIM66O15016 1216 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 SOAT2O75908 522 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 CYP11B1P15538 503 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 HOXB8P17481 243 aaPredicted RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 FXR1P51114 621 aaKnown RBP eCLIP10.59□□□□□ -0.71
SP1-202ENST00000426431 CACNB2Q08289 660 aaPredicted RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 CAPRIN1Q14444 709 aaKnown RBP10.59□□□□□ -0.71
SP1-202ENST00000426431 C11orf63Q6NUN7 778 aa10.59□□□□□ -0.71
SP1-202ENST00000426431 CFLARO15519 480 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 TIMM44O43615 452 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 MBL2P11226 248 aaPredicted RBP10.58□□□□□ -0.72
SP1-202ENST00000426431 PRMT2P55345 433 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 PKN1Q16512 942 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 FMN2Q9NZ56 1722 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 E2F6O75461 281 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 TGM2P21980 687 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 AVPR1AP37288 418 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 LIG3P49916 1009 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 IL1RL1Q01638 556 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 USP10Q14694 798 aaKnown RBP10.58□□□□□ -0.72
SP1-202ENST00000426431 FAM83EQ2M2I3 478 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 RETSATQ6NUM9 610 aa10.58□□□□□ -0.72
SP1-202ENST00000426431 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms