RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 METTL5Q9NRN9 209 aaKnown RBP18.34■□□□□ 0.53
FN1-208ENST00000426059 PCDHA3Q9Y5H8 950 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 ITGB1P05556 798 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 CLCN6P51797 869 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 VSNL1P62760 191 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 TIGD5Q53EQ6 642 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 KIAA0319Q5VV43 1072 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 ZNF280BQ86YH2 543 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 MMGT1Q8N4V1 131 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 TOP6BLQ8N6T0 577 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 MSANTD4Q8NCY6 345 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 SLC2A14Q8TDB8 520 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 PPP1R12CQ9BZL4 782 aa18.34■□□□□ 0.53
FN1-208ENST00000426059 CLDN5O00501 218 aa18.33■□□□□ 0.53
FN1-208ENST00000426059 KRT3P12035 628 aa18.33■□□□□ 0.53
FN1-208ENST00000426059 TKTP29401 623 aaKnown RBP18.33■□□□□ 0.53
FN1-208ENST00000426059 PDE4CQ08493 712 aa18.33■□□□□ 0.53
FN1-208ENST00000426059 BFSP2Q13515 415 aa18.33■□□□□ 0.53
FN1-208ENST00000426059 LONRF2Q1L5Z9 754 aa18.33■□□□□ 0.53
FN1-208ENST00000426059 PKDCCQ504Y2 493 aa18.33■□□□□ 0.53
FN1-208ENST00000426059 CLLU1OSQ5K130 101 aa18.33■□□□□ 0.53
FN1-208ENST00000426059 CRYBG2Q8N1P7 616 aa18.33■□□□□ 0.53
FN1-208ENST00000426059 DMGDHQ9UI17 866 aaKnown RBP18.33■□□□□ 0.53
FN1-208ENST00000426059 STRIP2Q9ULQ0 834 aa18.33■□□□□ 0.53
FN1-208ENST00000426059 LAMA2P24043 3122 aaKnown RBP18.33■□□□□ 0.52
FN1-208ENST00000426059 KRIT1O00522 736 aa18.33■□□□□ 0.52
FN1-208ENST00000426059 GRAP2O75791 330 aa18.33■□□□□ 0.52
FN1-208ENST00000426059 SKIP12755 728 aa18.33■□□□□ 0.52
FN1-208ENST00000426059 ITIH3Q06033 890 aa18.33■□□□□ 0.52
FN1-208ENST00000426059 DDX43Q9NXZ2 648 aaKnown RBP18.33■□□□□ 0.52
FN1-208ENST00000426059 HESX1Q9UBX0 185 aa18.33■□□□□ 0.52
FN1-208ENST00000426059 CCDC66A2RUB6 948 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 GABBR2O75899 941 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 SEC31AO94979 1220 aaKnown RBP18.32■□□□□ 0.52
FN1-208ENST00000426059 WARSP23381 471 aaKnown RBP18.32■□□□□ 0.52
FN1-208ENST00000426059 GRIK3Q13003 919 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 ATP13A4Q4VNC1 1196 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 SLC39A5Q6ZMH5 540 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 B3GALNT2Q8NCR0 500 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 B3GNT5Q9BYG0 378 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 DDX47Q9H0S4 455 aaKnown RBP18.32■□□□□ 0.52
FN1-208ENST00000426059 KLHL11Q9NVR0 708 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 TMEM59LQ9UK28 342 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 TCRBV7S2A1N4TA0A589 114 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 DDHD2O94830 711 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 CTNNA2P26232 953 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 RABGGTBP53611 331 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 RWDD2BP57060 319 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 TUSC3Q13454 348 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 TRIM60Q495X7 471 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 FAM102AQ5T9C2 384 aaPredicted RBP18.32■□□□□ 0.52
FN1-208ENST00000426059 OR6B2Q6IFH4 312 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 CD300LGQ6UXG3 332 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 FAM183BPQ6ZVS7 135 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 SCUBE3Q8IX30 993 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 IP6K2Q9UHH9 426 aa18.32■□□□□ 0.52
FN1-208ENST00000426059 KIAA0100Q14667 2235 aaKnown RBP18.32■□□□□ 0.52
FN1-208ENST00000426059 SIGLEC16A6NMB1 481 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 GABRDO14764 452 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
FN1-208ENST00000426059 GABRB2P47870 512 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 GATMP50440 423 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 TAF5Q15542 800 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 SMYD5Q6GMV2 418 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 GLB1LQ6UWU2 654 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.31■□□□□ 0.52
FN1-208ENST00000426059 SLC35F5Q8WV83 523 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 MIS12Q9H081 205 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 UBN1Q9NPG3 1134 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 ZSCAN5CA6NGD5 496 aaPredicted RBP18.31■□□□□ 0.52
FN1-208ENST00000426059 ENPP3O14638 875 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 PTPN1P18031 435 aaKnown RBP18.31■□□□□ 0.52
FN1-208ENST00000426059 SLC1A1P43005 524 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 TUBB4BP68371 445 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 TLE2Q04725 743 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 FAAP100Q0VG06 881 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 STILQ15468 1287 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 PLEKHG4Q58EX7 1191 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 MDH1BQ5I0G3 518 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 ARHGAP17Q68EM7 881 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 TXNRD3NBQ6F5E7 133 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 C8orf74Q6P047 294 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 CC2D1AQ6P1N0 951 aaPredicted RBP18.31■□□□□ 0.52
FN1-208ENST00000426059 ZDHHC14Q8IZN3 488 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 IPO4Q8TEX9 1081 aaKnown RBP18.31■□□□□ 0.52
FN1-208ENST00000426059 ACSF2Q96CM8 615 aaPredicted RBP18.31■□□□□ 0.52
FN1-208ENST00000426059 TNIP3Q96KP6 325 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 HIPK3Q9H422 1215 aa18.31■□□□□ 0.52
FN1-208ENST00000426059 EOMESO95936 686 aa18.3■□□□□ 0.52
FN1-208ENST00000426059 CYP2C18P33260 490 aa18.3■□□□□ 0.52
FN1-208ENST00000426059 FAM189BP81408 668 aa18.3■□□□□ 0.52
FN1-208ENST00000426059 ZNF268Q14587 947 aaPredicted RBP18.3■□□□□ 0.52
FN1-208ENST00000426059 DEFB128Q7Z7B8 93 aa18.3■□□□□ 0.52
FN1-208ENST00000426059 CLEC4CQ8WTT0 213 aa18.3■□□□□ 0.52
FN1-208ENST00000426059 MCRS1Q96EZ8 462 aa18.3■□□□□ 0.52
FN1-208ENST00000426059 DDX27Q96GQ7 796 aaKnown RBP18.3■□□□□ 0.52
FN1-208ENST00000426059 ZNF446Q9NWS9 450 aa18.3■□□□□ 0.52
FN1-208ENST00000426059 BEST1O76090 585 aa18.3■□□□□ 0.52
FN1-208ENST00000426059 PSMA2P25787 234 aa18.3■□□□□ 0.52
FN1-208ENST00000426059 SEL1L2Q5TEA6 688 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms