RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ITGA11Q9UKX5 1188 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 AGAP1Q9UPQ3 857 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 ASXL3Q9C0F0 2248 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 MTMR11A4FU01 709 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 K7ESF4 209 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 ZNF197O14709 1029 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 CLIC2O15247 247 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 TOP3BO95985 862 aaKnown RBP13.67□□□□□ -0.22
SGCE-203ENST00000425444 TNNC2P02585 160 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 CYP11A1P05108 521 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 CHRNB1P11230 501 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 CEBPBP17676 345 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 HOXD13P35453 343 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 EPHB3P54753 998 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 EHHADHQ08426 723 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 DUSP4Q13115 394 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 SLC5A9Q2M3M2 681 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 SLC39A12Q504Y0 691 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 OR10T2Q8NGX3 314 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 SCFD1Q8WVM8 642 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 PAGE5Q96GU1 130 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 LOXL4Q96JB6 756 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 FAM84AQ96KN4 292 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 TMEM209Q96SK2 561 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 WASF3Q9UPY6 502 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 ACACAQ13085 2346 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 TSC2P49815 1807 aa13.67□□□□□ -0.22
SGCE-203ENST00000425444 TICRRQ7Z2Z1 1910 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 EPN2O95208 641 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 PAPSS2O95340 614 aaPredicted RBP13.66□□□□□ -0.22
SGCE-203ENST00000425444 MYL4P12829 197 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 CCNE1P24864 410 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 GDI1P31150 447 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 ALDH1A3P47895 512 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 SNRPFP62306 86 aaKnown RBP13.66□□□□□ -0.22
SGCE-203ENST00000425444 RBP5P82980 135 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 SNRNP35Q16560 246 aaKnown RBP13.66□□□□□ -0.22
SGCE-203ENST00000425444 WSCD1Q658N2 575 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 LRRC52Q8N7C0 313 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 FSIP1Q8NA03 581 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 XXYLT1Q8NBI6 393 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 RDH13Q8NBN7 331 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 ATAD1Q8NBU5 361 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 LEMD2Q8NC56 503 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 TCEAL4Q96EI5 215 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 FNBP1Q96RU3 617 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 SEPT5Q99719 369 aaPredicted RBP13.66□□□□□ -0.22
SGCE-203ENST00000425444 SCNM1Q9BWG6 230 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 GDPD2Q9HCC8 539 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 ZFP14Q9HCL3 533 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 ZNF334Q9HCZ1 680 aaPredicted RBP13.66□□□□□ -0.22
SGCE-203ENST00000425444 AVENQ9NQS1 362 aaPredicted RBP13.66□□□□□ -0.22
SGCE-203ENST00000425444 RBM12Q9NTZ6 932 aaKnown RBP13.66□□□□□ -0.22
SGCE-203ENST00000425444 INTS13Q9NVM9 706 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 CEP72Q9P209 647 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 HPSEQ9Y251 543 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 SLC27A5Q9Y2P5 690 aa13.66□□□□□ -0.22
SGCE-203ENST00000425444 MYO18BQ8IUG5 2567 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 SCN1AP35498 2009 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 TGFB1I1O43294 461 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 HUS1O60921 280 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 CLSTN1O94985 981 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 VNN2O95498 520 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 MYL1P05976 194 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 DLATP10515 647 aaKnown RBP13.65□□□□□ -0.22
SGCE-203ENST00000425444 TNNI1P19237 187 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 FCARP24071 287 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 NDUFA8P51970 172 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 TSPY1Q01534 308 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 MYO1EQ12965 1108 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 LRRC32Q14392 662 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 KNOP1Q1ED39 458 aaKnown RBP13.65□□□□□ -0.22
SGCE-203ENST00000425444 DUOXA2Q1HG44 320 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 BMT2Q1RMZ1 405 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 MGAT5BQ3V5L5 792 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 KMT5BQ4FZB7 885 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 CENPPQ6IPU0 288 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 POTEHQ6S545 545 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 CACNA2D4Q7Z3S7 1137 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 WDR5BQ86VZ2 330 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 DCP1BQ8IZD4 617 aaKnown RBP13.65□□□□□ -0.22
SGCE-203ENST00000425444 HS6ST3Q8IZP7 471 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 OR5B17Q8NGF7 314 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 GOLGA5Q8TBA6 731 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 FAM200AQ8TCP9 573 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 CCDC47Q96A33 483 aaKnown RBP13.65□□□□□ -0.22
SGCE-203ENST00000425444 ZCWPW1Q9H0M4 648 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 CRISPLD1Q9H336 500 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 SLITRK6Q9H5Y7 841 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 ABI2Q9NYB9 513 aaPredicted RBP13.65□□□□□ -0.22
SGCE-203ENST00000425444 CGNQ9P2M7 1197 aaKnown RBP13.65□□□□□ -0.22
SGCE-203ENST00000425444 SNX9Q9Y5X1 595 aa13.65□□□□□ -0.22
SGCE-203ENST00000425444 PTPRJQ12913 1337 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 TCHHQ07283 1943 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 C4orf47A7E2U8 309 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 KLRC4O43908 158 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 EXOC3O60645 756 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 PRPF40AO75400 957 aaKnown RBP13.64□□□□□ -0.23
SGCE-203ENST00000425444 SOAT2O75908 522 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms