RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 DUOXA2Q1HG44 320 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 SMTNL2Q2TAL5 461 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 DNAJC24Q6P3W2 148 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 FEZF2Q8TBJ5 459 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 KLHL29Q96CT2 875 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 PCYT2Q99447 389 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 ELP3Q9H9T3 547 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 NXF1Q9UBU9 619 aaKnown RBP13.66□□□□□ -0.22
COL12A1-205ENST00000425443 RASA4BC9J798 803 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 RASA4O43374 803 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 PSTPIP1O43586 416 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 FGFR1P11362 822 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 NEFHP12036 1026 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 RIPK1Q13546 671 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 NOL9Q5SY16 702 aaKnown RBP13.66□□□□□ -0.22
COL12A1-205ENST00000425443 CYP4A22Q5TCH4 519 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 PPP1R2P3Q6NXS1 205 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 METTL7BQ6UX53 244 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 RIOX2Q8IUF8 465 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 C4orf33Q8N1A6 199 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 DCPSQ96C86 337 aaKnown RBP13.66□□□□□ -0.22
COL12A1-205ENST00000425443 FAM167AQ96KS9 214 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 ZNF570Q96NI8 536 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 RBM15Q96T37 977 aaKnown RBP eCLIP13.66□□□□□ -0.22
COL12A1-205ENST00000425443 VPS37BQ9H9H4 285 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 IP6K2Q9UHH9 426 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 ARL2BPQ9Y2Y0 163 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 SNCAIPQ9Y6H5 919 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 ARID2Q68CP9 1835 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 LTBP3Q9NS15 1303 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 CFAP73A6NFT4 308 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 MAFO75444 373 aaPredicted RBP13.66□□□□□ -0.22
COL12A1-205ENST00000425443 KRT1P04264 644 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 LAMTOR4Q0VGL1 99 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 IER5Q5VY09 327 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 TXNRD3NBQ6F5E7 133 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 ZPBP2Q6X784 338 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 SYDE1Q6ZW31 735 aaPredicted RBP13.66□□□□□ -0.22
COL12A1-205ENST00000425443 BRSK2Q8IWQ3 736 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 SDR16C5Q8N3Y7 309 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 TMEM35BQ8NCS4 154 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 MAML1Q92585 1016 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 VCPIP1Q96JH7 1222 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 LGALS13Q9UHV8 139 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 DNPEPQ9ULA0 475 aa13.66□□□□□ -0.22
COL12A1-205ENST00000425443 CNTNAP2Q9UHC6 1331 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 F8VP50 259 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 ATP6V1G1O75348 118 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 AP3M2P53677 418 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 C1QBPQ07021 282 aaKnown RBP13.65□□□□□ -0.22
COL12A1-205ENST00000425443 SH3D19Q5HYK7 790 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 ANKMY2Q8IV38 441 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 GPC2Q8N158 579 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 CCDC89Q8N998 374 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 TMEM237Q96Q45 408 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 RXFP1Q9HBX9 757 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 NUMBLQ9Y6R0 609 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 PARP14Q460N5 1801 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 LRRD1A4D1F6 860 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 OGTO15294 1046 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 TCEA3O75764 348 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 TNNC2P02585 160 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 CALB1P05937 261 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 TGFB3P10600 412 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 KRT15P19012 456 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 LACTBP83111 547 aaPredicted RBP13.65□□□□□ -0.22
COL12A1-205ENST00000425443 GAD2Q05329 585 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 DNAJC3Q13217 504 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 MXD4Q14582 209 aaPredicted RBP13.65□□□□□ -0.22
COL12A1-205ENST00000425443 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 KCNT1Q5JUK3 1230 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 PHF13Q86YI8 300 aaPredicted RBP13.65□□□□□ -0.22
COL12A1-205ENST00000425443 MAGEB18Q96M61 343 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 SPATA33Q96N06 139 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 CENPOQ9BU64 300 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 IQCGQ9H095 443 aaKnown RBP13.65□□□□□ -0.22
COL12A1-205ENST00000425443 SYNCQ9H7C4 482 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 CISHQ9NSE2 258 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 NKIRAS1Q9NYS0 192 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 SUN2Q9UH99 717 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 C15orf41Q9Y2V0 281 aa13.65□□□□□ -0.22
COL12A1-205ENST00000425443 RLFQ13129 1914 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 EXOC1LA0A1B0GW35 172 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 IGBP1P78318 339 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 GPS1Q13098 491 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 KCTD2Q14681 263 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 MTFR1Q15390 333 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 SGSM1Q2NKQ1 1148 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 HSDL1Q3SXM5 330 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 YIPF3Q9GZM5 350 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 MYLK2Q9H1R3 596 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 MMADHCQ9H3L0 296 aaPredicted RBP13.64□□□□□ -0.23
COL12A1-205ENST00000425443 IVNS1ABPQ9Y6Y0 642 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 IGKV6D-21A0A0A0MT36 114 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 DIAPH2O60879 1101 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 ZNF189O75820 626 aaPredicted RBP13.64□□□□□ -0.23
COL12A1-205ENST00000425443 ITGBL1O95965 494 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms