RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 CSH2P0DML3 217 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 PNPLA4P41247 253 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 ZXDBP98169 803 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 CUL4AQ13619 759 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 SF3A2Q15428 464 aaKnown RBP16.11■□□□□ 0.17
ATG4B-209ENST00000425239 ZNF77Q15935 545 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 NFE2Q16621 373 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-209ENST00000425239 CFAP221Q4G0U5 840 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 INTS6LQ5JSJ4 861 aaKnown RBP16.11■□□□□ 0.17
ATG4B-209ENST00000425239 FAM171BQ6P995 826 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 CAMKK1Q8N5S9 505 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 LRRC52Q8N7C0 313 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 SAAL1Q96ER3 474 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 GCNAQ96QF7 691 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 MRPL44Q9H9J2 332 aaKnown RBP16.11■□□□□ 0.17
ATG4B-209ENST00000425239 KIF9Q9HAQ2 790 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 DDX43Q9NXZ2 648 aaKnown RBP16.11■□□□□ 0.17
ATG4B-209ENST00000425239 TBC1D7Q9P0N9 293 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 STK17AQ9UEE5 414 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 MYO16Q9Y6X6 1858 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 USP24Q9UPU5 2620 aa16.11■□□□□ 0.17
ATG4B-209ENST00000425239 KIAA1549LQ6ZVL6 1849 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 RNF40O75150 1001 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 RPP40O75818 363 aaKnown RBP16.1■□□□□ 0.17
ATG4B-209ENST00000425239 GARTP22102 1010 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 ACAT1P24752 427 aaKnown RBP16.1■□□□□ 0.17
ATG4B-209ENST00000425239 TFAMQ00059 246 aaKnown RBP16.1■□□□□ 0.17
ATG4B-209ENST00000425239 TSPY1Q01534 308 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 GRSF1Q12849 480 aaKnown RBP eCLIP16.1■□□□□ 0.17
ATG4B-209ENST00000425239 CCDC6Q16204 474 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 TAF12Q16514 161 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 SOWAHAQ2M3V2 549 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 CEP68Q76N32 757 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 CACNA2D4Q7Z3S7 1137 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 TMEM86AQ8N2M4 240 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 SPATA18Q8TC71 538 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 ZNF560Q96MR9 790 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 ACCSQ96QU6 501 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 CBWD1Q9BRT8 395 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 ECT2Q9H8V3 914 aa16.1■□□□□ 0.17
ATG4B-209ENST00000425239 MAGED2Q9UNF1 606 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-209ENST00000425239 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-209ENST00000425239 ANTXRLA6NF34 631 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 ATG13O75143 517 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 ATP2C2O75185 946 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 AKAP3O75969 853 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 LDHAP00338 332 aaKnown RBP16.09■□□□□ 0.17
ATG4B-209ENST00000425239 GAP43P17677 238 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 DRD1P21728 446 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 LMO2P25791 158 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 HOXD13P35453 343 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 FAM160A1Q05DH4 1040 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 BFSP1Q12934 665 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 PDGFRLQ15198 375 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 EML3Q32P44 896 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 FAM173BQ6P4H8 233 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 SV2BQ7L1I2 683 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 CSGALNACT2Q8N6G5 542 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 TOP6BLQ8N6T0 577 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 OSCP1Q8WVF1 389 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 KBTBD7Q8WVZ9 684 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 MRPS31Q92665 395 aaKnown RBP16.09■□□□□ 0.17
ATG4B-209ENST00000425239 P2RY13Q9BPV8 354 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 DUSP15Q9H1R2 295 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-209ENST00000425239 LINC00597Q9H2U6 94 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 PDE11AQ9HCR9 933 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 ITGA11Q9UKX5 1188 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 MORC2Q9Y6X9 1032 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-209ENST00000425239 PTPRJQ12913 1337 aa16.09■□□□□ 0.17
ATG4B-209ENST00000425239 GOLGA8IPA6NC78 632 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 C2orf78A6NCI8 922 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 GOLGA8JA6NMD2 632 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 HUS1O60921 280 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 TCF3P15923 654 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 RPL10AP62906 217 aaKnown RBP16.08■□□□□ 0.16
ATG4B-209ENST00000425239 USP4Q13107 963 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 RESTQ13127 1097 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 MTF1Q14872 753 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 GAB4Q2WGN9 574 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 PLK5Q496M5 336 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 RRAGBQ5VZM2 374 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 SYT13Q7L8C5 426 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 GLIS3Q8NEA6 775 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 OR5B17Q8NGF7 314 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 RASSF8Q8NHQ8 419 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 CACTINQ8WUQ7 758 aaKnown RBP16.08■□□□□ 0.16
ATG4B-209ENST00000425239 FUBP3Q96I24 572 aaKnown RBP eCLIP16.08■□□□□ 0.16
ATG4B-209ENST00000425239 RBAKQ9NYW8 714 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-209ENST00000425239 EBF1Q9UH73 591 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 SLC8A2Q9UPR5 921 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 EXOC7Q9UPT5 735 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 NME7Q9Y5B8 376 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 PCDHB13Q9Y5F0 798 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 SNX9Q9Y5X1 595 aa16.08■□□□□ 0.16
ATG4B-209ENST00000425239 ZZEF1O43149 2961 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 SPEGQ15772 3267 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 CHRM1P11229 460 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-209ENST00000425239 MAGEA11P43364 429 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 LHX1P48742 406 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 DPH6Q7L8W6 267 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms