RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 OR5B17Q8NGF7 314 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 MRPS31Q92665 395 aaKnown RBP19.03■□□□□ 0.64
GPC1-203ENST00000425056 USP13Q92995 863 aaPredicted RBP19.03■□□□□ 0.64
GPC1-203ENST00000425056 DHX58Q96C10 678 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 MYRFLQ96LU7 910 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 FAM83CQ9BQN1 747 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 TDP1Q9NUW8 608 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 HSPBP1Q9NZL4 362 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 TFIP11Q9UBB9 837 aaKnown RBP19.03■□□□□ 0.64
GPC1-203ENST00000425056 UXTQ9UBK9 157 aaPredicted RBP19.03■□□□□ 0.64
GPC1-203ENST00000425056 GTF3C4Q9UKN8 822 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 MAGED2Q9UNF1 606 aaPredicted RBP19.03■□□□□ 0.64
GPC1-203ENST00000425056 ANAPC1Q9H1A4 1944 aa19.03■□□□□ 0.64
GPC1-203ENST00000425056 K7ESF4 209 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 HCRTO43612 131 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 TNNC2P02585 160 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 AMPD3Q01432 767 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 MYO1EQ12965 1108 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 ZNF268Q14587 947 aaPredicted RBP19.02■□□□□ 0.64
GPC1-203ENST00000425056 DDR2Q16832 855 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 FAM26FQ5R3K3 315 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 TXNDC8Q6A555 127 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 SHC4Q6S5L8 630 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 MON1AQ86VX9 555 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 WDR49Q8IV35 697 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 SYNPOQ8N3V7 929 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 IQUBQ8NA54 791 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 KBTBD7Q8WVZ9 684 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 MAGEF1Q9HAY2 307 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 KIAA1586Q9HCI6 787 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 HPS4Q9NQG7 708 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 GKN1Q9NS71 199 aa19.02■□□□□ 0.64
GPC1-203ENST00000425056 HELZP42694 1942 aaKnown RBP19.02■□□□□ 0.63
GPC1-203ENST00000425056 UBE4BO95155 1302 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 EHHADHQ08426 723 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 DUOXA2Q1HG44 320 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 FAM171BQ6P995 826 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 DGLUCYQ7Z3D6 616 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 SPATA2LQ8IUW3 424 aaPredicted RBP19.01■□□□□ 0.63
GPC1-203ENST00000425056 RIN3Q8TB24 985 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 ZNF507Q8TCN5 953 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 SNX21Q969T3 373 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 HPDLQ96IR7 371 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 AGPAT3Q9NRZ7 376 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 GMEB2Q9UKD1 530 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 RAB23Q9ULC3 237 aa19.01■□□□□ 0.63
GPC1-203ENST00000425056 R3HCC1Q9Y3T6 440 aaKnown RBP19.01■□□□□ 0.63
GPC1-203ENST00000425056 TGFB1I1O43294 461 aa19■□□□□ 0.63
GPC1-203ENST00000425056 TGM1P22735 817 aa19■□□□□ 0.63
GPC1-203ENST00000425056 MAGEA11P43364 429 aa19■□□□□ 0.63
GPC1-203ENST00000425056 DMWDQ09019 674 aa19■□□□□ 0.63
GPC1-203ENST00000425056 RUNX3Q13761 415 aa19■□□□□ 0.63
GPC1-203ENST00000425056 SNRNP35Q16560 246 aaKnown RBP19■□□□□ 0.63
GPC1-203ENST00000425056 LAIR1Q6GTX8 287 aa19■□□□□ 0.63
GPC1-203ENST00000425056 C4orf50Q6ZRC1 276 aa19■□□□□ 0.63
GPC1-203ENST00000425056 CHFRQ96EP1 664 aa19■□□□□ 0.63
GPC1-203ENST00000425056 C7orf25Q9BPX7 421 aa19■□□□□ 0.63
GPC1-203ENST00000425056 SYT15Q9BQS2 421 aa19■□□□□ 0.63
GPC1-203ENST00000425056 C2orf42Q9NWW7 574 aa19■□□□□ 0.63
GPC1-203ENST00000425056 CDH9Q9ULB4 789 aa19■□□□□ 0.63
GPC1-203ENST00000425056 OTOL1A6NHN0 477 aaPredicted RBP18.99■□□□□ 0.63
GPC1-203ENST00000425056 CHURC1-FNTBB4DL54 471 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 WARSP23381 471 aaKnown RBP18.99■□□□□ 0.63
GPC1-203ENST00000425056 HOXA6P31267 233 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 CNR2P34972 360 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 FNTBP49356 437 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 LMNB2Q03252 620 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 FAM160A1Q05DH4 1040 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 RSPO4Q2I0M5 234 aaPredicted RBP18.99■□□□□ 0.63
GPC1-203ENST00000425056 TMEM196Q5HYL7 178 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 TRIM68Q6AZZ1 485 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 UNC13DQ70J99 1090 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 LONP2Q86WA8 852 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 EBF3Q9H4W6 596 aa18.99■□□□□ 0.63
GPC1-203ENST00000425056 TRDMT1O14717 391 aaKnown RBP18.98■□□□□ 0.63
GPC1-203ENST00000425056 ATP2C2O75185 946 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 PDIA4P13667 645 aaKnown RBP18.98■□□□□ 0.63
GPC1-203ENST00000425056 LMO2P25791 158 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 PSMC1P62191 440 aaKnown RBP18.98■□□□□ 0.63
GPC1-203ENST00000425056 SNRPFP62306 86 aaKnown RBP18.98■□□□□ 0.63
GPC1-203ENST00000425056 USP4Q13107 963 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 PSMD6Q15008 389 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 PDGFRLQ15198 375 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 MAPRE1Q15691 268 aaKnown RBP18.98■□□□□ 0.63
GPC1-203ENST00000425056 ZNF77Q15935 545 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 LPAL2Q16609 132 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 CC2D1AQ6P1N0 951 aaPredicted RBP18.98■□□□□ 0.63
GPC1-203ENST00000425056 VSTM1Q6UX27 236 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 TRAPPC11Q7Z392 1133 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 SCN4BQ8IWT1 228 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 SCFD1Q8WVM8 642 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 MYLPFQ96A32 169 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 CEP295NLQ96MC4 621 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 CGRRF1Q99675 332 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 PARD6AQ9NPB6 346 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 CRTAC1Q9NQ79 661 aa18.98■□□□□ 0.63
GPC1-203ENST00000425056 TRAV19A0A0A6YYK7 116 aa18.97■□□□□ 0.63
GPC1-203ENST00000425056 POLR2DO15514 142 aaKnown RBP18.97■□□□□ 0.63
GPC1-203ENST00000425056 USP17L7P0C7H9 530 aa18.97■□□□□ 0.63
GPC1-203ENST00000425056 ZSCAN22P10073 491 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms