RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 PDGFRBP09619 1106 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 ANXA13P27216 316 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 WEE1P30291 646 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 ATICP31939 592 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 PLCB2Q00722 1185 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 CYP27A1Q02318 531 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 CELF5Q8N6W0 485 aaKnown RBP17.72■□□□□ 0.43
SHANK2-207ENST00000425049 STKLD1Q8NE28 680 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 BPIFB1Q8TDL5 484 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 RSPRY1Q96DX4 576 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 PKMYT1Q99640 499 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 C8orf33Q9H7E9 229 aaPredicted RBP17.72■□□□□ 0.43
SHANK2-207ENST00000425049 NXF1Q9UBU9 619 aaKnown RBP17.72■□□□□ 0.43
SHANK2-207ENST00000425049 FRMD4BQ9Y2L6 1034 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 NCANO14594 1321 aa17.72■□□□□ 0.43
SHANK2-207ENST00000425049 COL4A3Q01955 1670 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 FAM237AA0A1B0GTK4 181 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 GOLGA6L4A6NEF3 574 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 PRR23AA6NEV1 266 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 SLC38A8A6NNN8 435 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 PDXKO00764 312 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 NOL4O94818 638 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 PRAMEF12O95522 483 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 HMGA1P17096 107 aaKnown RBP17.71■□□□□ 0.43
SHANK2-207ENST00000425049 LMO2P25791 158 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 GNL1P36915 607 aaPredicted RBP17.71■□□□□ 0.43
SHANK2-207ENST00000425049 MAGEA11P43364 429 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 RPS9P46781 194 aaKnown RBP17.71■□□□□ 0.43
SHANK2-207ENST00000425049 MYL6P60660 151 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 CCDC142Q17RM4 750 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 ZNF699Q32M78 642 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 CEP135Q66GS9 1140 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 FAM171BQ6P995 826 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 VSTM1Q6UX27 236 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 LIMS2Q7Z4I7 341 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 SLC9A9Q8IVB4 645 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 CMTM8Q8IZV2 173 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 MAB21L3Q8N8X9 362 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 SEMA4AQ9H3S1 761 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 KIF9Q9HAQ2 790 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 TRPC7Q9HCX4 862 aa17.71■□□□□ 0.43
SHANK2-207ENST00000425049 ATP2C2O75185 946 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 TACC1O75410 805 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 STAU1O95793 577 aaKnown RBP17.7■□□□□ 0.42
SHANK2-207ENST00000425049 CST3P01034 146 aaPredicted RBP17.7■□□□□ 0.42
SHANK2-207ENST00000425049 F11P03951 625 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 SP9P0CG40 484 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 CCNE1P24864 410 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 GRIK1P39086 918 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 CASP4P49662 377 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 MLLT6P55198 1093 aaPredicted RBP17.7■□□□□ 0.42
SHANK2-207ENST00000425049 MDH1BQ5I0G3 518 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 CC2D1AQ6P1N0 951 aaPredicted RBP17.7■□□□□ 0.42
SHANK2-207ENST00000425049 KRBA2Q6ZNG9 492 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 ASCL5Q7RTU5 278 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 CLDN23Q96B33 292 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 TRMT2BQ96GJ1 504 aaKnown RBP17.7■□□□□ 0.42
SHANK2-207ENST00000425049 MRPL45Q9BRJ2 306 aaKnown RBP17.7■□□□□ 0.42
SHANK2-207ENST00000425049 SLC46A2Q9BY10 475 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 SMG9Q9H0W8 520 aaKnown RBP17.7■□□□□ 0.42
SHANK2-207ENST00000425049 KCTD10Q9H3F6 313 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 GDPD2Q9HCC8 539 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 CRTAC1Q9NQ79 661 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 EHD2Q9NZN4 543 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 FBXO4Q9UKT5 387 aa17.7■□□□□ 0.42
SHANK2-207ENST00000425049 LRRIQ3A6PVS8 624 aaPredicted RBP17.69■□□□□ 0.42
SHANK2-207ENST00000425049 SOBPA7XYQ1 873 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 A8MXQ7 604 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 ARNTLO00327 626 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 TRIM66O15016 1216 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 RHOBTB3O94955 611 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 FAM163BP0C2L3 166 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 PRR29P0C7W0 189 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 P4HA1P13674 534 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 BDNFP23560 247 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 NCOA4Q13772 614 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 LRRC32Q14392 662 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 PPP2R5DQ14738 602 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 ZNF667Q5HYK9 610 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 TDRD10Q5VZ19 366 aaKnown RBP17.69■□□□□ 0.42
SHANK2-207ENST00000425049 TXNDC8Q6A555 127 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 TMEM150AQ86TG1 271 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 MON1AQ86VX9 555 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 MYCBPAPQ8TBZ2 947 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 PARD3BQ8TEW8 1205 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 ZNF516Q92618 1163 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 PCED1BQ96HM7 432 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 ZFYVE19Q96K21 471 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 MYRFLQ96LU7 910 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 IER2Q9BTL4 223 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 DMAC2Q9NW81 257 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 R4GN57 208 aa17.69■□□□□ 0.42
SHANK2-207ENST00000425049 NUP210Q8TEM1 1887 aaPredicted RBP17.69■□□□□ 0.42
SHANK2-207ENST00000425049 TICRRQ7Z2Z1 1910 aa17.68■□□□□ 0.42
SHANK2-207ENST00000425049 F5P12259 2224 aa17.68■□□□□ 0.42
SHANK2-207ENST00000425049 TRAV19A0A0A6YYK7 116 aa17.68■□□□□ 0.42
SHANK2-207ENST00000425049 ZNF202O95125 648 aa17.68■□□□□ 0.42
SHANK2-207ENST00000425049 CKMP06732 381 aa17.68■□□□□ 0.42
SHANK2-207ENST00000425049 NUCB2P80303 420 aa17.68■□□□□ 0.42
SHANK2-207ENST00000425049 CSTF1Q05048 431 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms