RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 TOP6BLQ8N6T0 577 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 TRIM43Q96BQ3 446 aaPredicted RBP15.88■□□□□ 0.13
CALD1-206ENST00000424922 ARHGEF26Q96DR7 871 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 SENP8Q96LD8 212 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 SNX25Q9H3E2 840 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 TBC1D13Q9NVG8 400 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 PCDH10Q9P2E7 1040 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 AMFRQ9UKV5 643 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 TTC7AQ9ULT0 858 aaPredicted RBP15.88■□□□□ 0.13
CALD1-206ENST00000424922 PCDHGC3Q9UN70 934 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 TSC2P49815 1807 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 CCDC188H7C350 402 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 PGRMC1O00264 195 aaKnown RBP15.88■□□□□ 0.13
CALD1-206ENST00000424922 B4GALT3O60512 393 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 DDHD2O94830 711 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 TIMP1P01033 207 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 PDGFRBP09619 1106 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 LMO2P25791 158 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 NSFP46459 744 aaKnown RBP15.88■□□□□ 0.13
CALD1-206ENST00000424922 GPC5P78333 572 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 CENPCQ03188 943 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 RNASELQ05823 741 aaKnown RBP15.88■□□□□ 0.13
CALD1-206ENST00000424922 SGO2Q562F6 1265 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 ALS2CLQ60I27 953 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 DSTYKQ6XUX3 929 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 ADGRF2Q8IZF7 708 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 C12orf29Q8N999 325 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 SLC35G2Q8TBE7 412 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 HASPINQ8TF76 798 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 VWCEQ96DN2 955 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.88■□□□□ 0.132e-7■□□□□ 11.1
CALD1-206ENST00000424922 KANSL3Q9P2N6 904 aa15.88■□□□□ 0.13
CALD1-206ENST00000424922 LTBP2Q14767 1821 aa15.87■□□□□ 0.13
CALD1-206ENST00000424922 ATMINO43313 823 aaPredicted RBP15.87■□□□□ 0.13
CALD1-206ENST00000424922 HEXIM1O94992 359 aaKnown RBP15.87■□□□□ 0.13
CALD1-206ENST00000424922 VDRP11473 427 aa15.87■□□□□ 0.13
CALD1-206ENST00000424922 GATMP50440 423 aa15.87■□□□□ 0.13
CALD1-206ENST00000424922 WSCD1Q658N2 575 aa15.87■□□□□ 0.13
CALD1-206ENST00000424922 UNC93AQ86WB7 457 aa15.87■□□□□ 0.13
CALD1-206ENST00000424922 UROC1Q96N76 676 aa15.87■□□□□ 0.13
CALD1-206ENST00000424922 KRT12Q99456 494 aa15.87■□□□□ 0.13
CALD1-206ENST00000424922 DPEP3Q9H4B8 488 aa15.87■□□□□ 0.13
CALD1-206ENST00000424922 OSGEPQ9NPF4 335 aa15.87■□□□□ 0.13
CALD1-206ENST00000424922 CHORDC1Q9UHD1 332 aaPredicted RBP15.87■□□□□ 0.13
CALD1-206ENST00000424922 GOLGA6BA6NDN3 693 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 BHMG1C9JSJ3 638 aaPredicted RBP15.86■□□□□ 0.13
CALD1-206ENST00000424922 I3L4J1 428 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 AGPSO00116 658 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 CEP104O60308 925 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 RNF40O75150 1001 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 GLI1P08151 1106 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 RAG1P15918 1043 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 RFC2P35250 354 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 DNA2P51530 1060 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 IKBKEQ14164 716 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 TIGD5Q53EQ6 642 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 C2CD6Q53TS8 623 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 DENND1BQ6P3S1 775 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 CNKSR3Q6P9H4 555 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 DAAM2Q86T65 1068 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 RHOT2Q8IXI1 618 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 MCOLN2Q8IZK6 566 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 CRIPAKQ8N1N5 446 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 MREGQ8N565 214 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 C1orf131Q8NDD1 294 aaKnown RBP15.86■□□□□ 0.13
CALD1-206ENST00000424922 ZNF653Q96CK0 615 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 FAM193BQ96PV7 902 aaPredicted RBP15.86■□□□□ 0.13
CALD1-206ENST00000424922 KIAA1257Q9ULG3 409 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 F8W810 466 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 KIAA0355O15063 1070 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 LSM8O95777 96 aaKnown RBP15.86■□□□□ 0.13
CALD1-206ENST00000424922 CSF2RAP15509 400 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 WARSP23381 471 aaKnown RBP15.86■□□□□ 0.13
CALD1-206ENST00000424922 DSC1Q08554 894 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 CNGA2Q16280 664 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 DCLRE1AQ6PJP8 1040 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 CD300LGQ6UXG3 332 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.86■□□□□ 0.13
CALD1-206ENST00000424922 OSTM1Q86WC4 334 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 COLGALT2Q8IYK4 626 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 TMEM35BQ8NCS4 154 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 CASD1Q96PB1 797 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 LPIN3Q9BQK8 851 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 DNAJB4Q9UDY4 337 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.86■□□□□ 0.13
CALD1-206ENST00000424922 CEP83Q9Y592 693 aa15.86■□□□□ 0.13
CALD1-206ENST00000424922 TIMM13Q9Y5L4 95 aaPredicted RBP15.86■□□□□ 0.13
CALD1-206ENST00000424922 O00370 1275 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 BUB1BO60566 1050 aaPredicted RBP15.85■□□□□ 0.13
CALD1-206ENST00000424922 MICAL2O94851 1124 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 ITGB1P05556 798 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 GGCXP38435 758 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 BRCC3P46736 316 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 GYS2P54840 703 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 CLUL1Q15846 466 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 MON1BQ7L1V2 547 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 PHLDB2Q86SQ0 1253 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 WDTC1Q8N5D0 677 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 SH3GL2Q99962 352 aa15.85■□□□□ 0.13
CALD1-206ENST00000424922 C11orf70Q9BRQ4 267 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms