RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 MBD3O95983 291 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 CYP2F1P24903 491 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 DDX6P26196 483 aaKnown RBP eCLIP17.34■□□□□ 0.37
DDR1-234ENST00000424544 CTHP32929 405 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 SOX9P48436 509 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 GPR15P49685 360 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 PLCB2Q00722 1185 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 MYL7Q01449 175 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 BMT2Q1RMZ1 405 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 FAM26FQ5R3K3 315 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 UNC13DQ70J99 1090 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 MON1AQ86VX9 555 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 FMR1NBQ8N0W7 255 aaPredicted RBP17.34■□□□□ 0.37
DDR1-234ENST00000424544 CELF5Q8N6W0 485 aaKnown RBP17.34■□□□□ 0.37
DDR1-234ENST00000424544 BPIFB1Q8TDL5 484 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 CSGALNACT1Q8TDX6 532 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 KBTBD7Q8WVZ9 684 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 ATRIPQ8WXE1 791 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 FUBP3Q96I24 572 aaKnown RBP eCLIP17.34■□□□□ 0.37
DDR1-234ENST00000424544 ZFYVE19Q96K21 471 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 MAGEF1Q9HAY2 307 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 AGPAT3Q9NRZ7 376 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 USP25Q9UHP3 1055 aa17.34■□□□□ 0.37
DDR1-234ENST00000424544 PVALEFA0A1B0GWK0 134 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 SPECC1L-ADORA2AF8WAN1 911 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 TADA3O75528 432 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 PAPSS2O95340 614 aaPredicted RBP17.33■□□□□ 0.36
DDR1-234ENST00000424544 CST3P01034 146 aaPredicted RBP17.33■□□□□ 0.36
DDR1-234ENST00000424544 FAM163BP0C2L3 166 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 CSH1P0DML2 217 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 CSH2P0DML3 217 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 ACAT1P24752 427 aaKnown RBP17.33■□□□□ 0.36
DDR1-234ENST00000424544 LMO2P25791 158 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 BFSP1Q12934 665 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 DDR2Q16832 855 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 CCDC142Q17RM4 750 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 SKOR2Q2VWA4 1001 aaPredicted RBP17.33■□□□□ 0.36
DDR1-234ENST00000424544 LMBRD2Q68DH5 695 aaPredicted RBP17.33■□□□□ 0.36
DDR1-234ENST00000424544 WDR49Q8IV35 697 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 DCLK2Q8N568 766 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 GPT2Q8TD30 523 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 TMEM174Q8WUU8 243 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 USP13Q92995 863 aaPredicted RBP17.33■□□□□ 0.36
DDR1-234ENST00000424544 CHFRQ96EP1 664 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 TRMT2BQ96GJ1 504 aaKnown RBP17.33■□□□□ 0.36
DDR1-234ENST00000424544 HPDLQ96IR7 371 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 EPC1Q9H2F5 836 aa17.33■□□□□ 0.36
DDR1-234ENST00000424544 OTOL1A6NHN0 477 aaPredicted RBP17.32■□□□□ 0.36
DDR1-234ENST00000424544 SLC38A8A6NNN8 435 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 DPYSL4O14531 572 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 ATP2C2O75185 946 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 KRT19P08727 400 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 TMEM191BP0C7N4 346 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 PCSK1P29120 753 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 CASP1P29466 404 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 MAGEA11P43364 429 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 RPL10AP62906 217 aaKnown RBP17.32■□□□□ 0.36
DDR1-234ENST00000424544 ASIC1P78348 528 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 TNK2Q07912 1038 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 CCINQ13939 588 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 ZNF268Q14587 947 aaPredicted RBP17.32■□□□□ 0.36
DDR1-234ENST00000424544 TAF12Q16514 161 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
DDR1-234ENST00000424544 SDHAF4Q5VUM1 108 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 TXNDC8Q6A555 127 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 TRAPPC11Q7Z392 1133 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 C12orf56Q8IXR9 622 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 ADGRF2Q8IZF7 708 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 SPEM1Q8N4L4 309 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 MAB21L3Q8N8X9 362 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 RIN3Q8TB24 985 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 ANKRD36BP1Q96IX9 119 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 TIGD1Q96MW7 591 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 SMG9Q9H0W8 520 aaKnown RBP17.32■□□□□ 0.36
DDR1-234ENST00000424544 GKN1Q9NS71 199 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 SERTAD1Q9UHV2 236 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 CCL26Q9Y258 94 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 NME7Q9Y5B8 376 aa17.32■□□□□ 0.36
DDR1-234ENST00000424544 UBE4BO95155 1302 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 TGM1P22735 817 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 WARSP23381 471 aaKnown RBP17.31■□□□□ 0.36
DDR1-234ENST00000424544 CXCL12P48061 93 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 CCR3P51677 355 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 KPNA1P52294 538 aaPredicted RBP17.31■□□□□ 0.36
DDR1-234ENST00000424544 FOXK2Q01167 660 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 MYO1EQ12965 1108 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 CUL4BQ13620 913 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 PSMD6Q15008 389 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 DGKKQ5KSL6 1271 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 CEP57L1Q8IYX8 460 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 SYNPOQ8N3V7 929 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 STKLD1Q8NE28 680 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 ZNF516Q92618 1163 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 CRTAC1Q9NQ79 661 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 HPS4Q9NQG7 708 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 TDP1Q9NUW8 608 aa17.31■□□□□ 0.36
DDR1-234ENST00000424544 CGNQ9P2M7 1197 aaKnown RBP17.31■□□□□ 0.36
DDR1-234ENST00000424544 KIF26AQ9ULI4 1882 aaPredicted RBP17.31■□□□□ 0.36
DDR1-234ENST00000424544 K7ESF4 209 aa17.3■□□□□ 0.36
DDR1-234ENST00000424544 CLIC2O15247 247 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms