RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 ZNF699Q32M78 642 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 ZNF667Q5HYK9 610 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 MIIPQ5JXC2 388 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 C1orf220Q5T0J3 134 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 TDRD10Q5VZ19 366 aaKnown RBP7.53□□□□□ -1.2
EPHA4-206ENST00000424339 SARM1Q6SZW1 724 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 ENOSF1Q7L5Y1 443 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 SYT9Q86SS6 491 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 SLC39A11Q8N1S5 342 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 TMEM86AQ8N2M4 240 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 COLGALT1Q8NBJ5 622 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 RNF214Q8ND24 703 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 APPL2Q8NEU8 664 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 OR5B17Q8NGF7 314 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 PLEKHO2Q8TD55 490 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 C18orf25Q96B23 403 aaPredicted RBP7.53□□□□□ -1.2
EPHA4-206ENST00000424339 TIFAQ96CG3 184 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 IGSF21Q96ID5 467 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 SUSD3Q96L08 255 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 NAP1L5Q96NT1 182 aaPredicted RBP7.53□□□□□ -1.2
EPHA4-206ENST00000424339 PBX4Q9BYU1 374 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 LMAN2LQ9H0V9 348 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 HSD3B7Q9H2F3 369 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 CWH43Q9H720 699 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 RAB20Q9NX57 234 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 MIOSQ9NXC5 875 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 GDAP2Q9NXN4 497 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 TUBGCP4Q9UGJ1 667 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 AGAP1Q9UPQ3 857 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 GBF1Q92538 1859 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 PTPRJQ12913 1337 aa7.52□□□□□ -1.2
EPHA4-206ENST00000424339 A0A1W2PQC6 194 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 CASTOR2A6NHX0 329 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 KPNA7A9QM74 516 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 M0QZQ0 153 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 PES1O00541 588 aaKnown RBP7.52□□□□□ -1.21
EPHA4-206ENST00000424339 TADA2AO75478 443 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 C1RP00736 705 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 HLA-DRAP01903 254 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 CA3P07451 260 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 TYMPP19971 482 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 POLR2BP30876 1174 aaKnown RBP7.52□□□□□ -1.21
EPHA4-206ENST00000424339 CTNNB1P35222 781 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 SLC11A1P49279 550 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 GATMP50440 423 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 AFF1P51825 1210 aaKnown RBP7.52□□□□□ -1.21
EPHA4-206ENST00000424339 UBASH3AP57075 661 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 LILRA4P59901 499 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 TNNC1P63316 161 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 NOP14P78316 857 aaKnown RBP7.52□□□□□ -1.21
EPHA4-206ENST00000424339 FANCCQ00597 558 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 GCNT1Q02742 428 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 TAP1Q03518 808 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 SOX4Q06945 474 aaPredicted RBP7.52□□□□□ -1.21
EPHA4-206ENST00000424339 CBWD6Q4V339 395 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 EPC2Q52LR7 807 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 CBWD3Q5JTY5 395 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 CBWD5Q5RIA9 395 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 DDX53Q86TM3 631 aaKnown RBP7.52□□□□□ -1.21
EPHA4-206ENST00000424339 METTL23Q86XA0 190 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 ZNF280BQ86YH2 543 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 TOP6BLQ8N6T0 577 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 CXorf38Q8TB03 319 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 TAS1R2Q8TE23 839 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 HPDLQ96IR7 371 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 NT5C1BQ96P26 610 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 ERGIC2Q96RQ1 377 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 POP1Q99575 1024 aaKnown RBP7.52□□□□□ -1.21
EPHA4-206ENST00000424339 NIF3L1Q9GZT8 377 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 XYLT2Q9H1B5 865 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 CYP3A43Q9HB55 503 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 PLCB1Q9NQ66 1216 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.52□□□□□ -1.21
EPHA4-206ENST00000424339 GCNT4Q9P109 453 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 DNAJB4Q9UDY4 337 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 SIX4Q9UIU6 781 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 FBXL5Q9UKA1 691 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 KIAA1671Q9BY89 1806 aa7.52□□□□□ -1.21
EPHA4-206ENST00000424339 SCN1AP35498 2009 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 H7C4K7 107 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 PAX4O43316 350 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 HUS1O60921 280 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 TACC1O75410 805 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 FGF18O76093 207 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 KIF4AO95239 1232 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 SOD2P04179 222 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 CYP11A1P05108 521 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 LINC00271P0C7V0 271 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 FAM157BP0CG42 384 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 ATP1A3P13637 1013 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 LHX1P48742 406 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 RABGGTBP53611 331 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 UBXN1Q04323 297 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 SMARCB1Q12824 385 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 PTPROQ16827 1216 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 USP41Q3LFD5 358 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 WDR72Q3MJ13 1102 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 HSP90AA4PQ58FG1 418 aa7.51□□□□□ -1.21
EPHA4-206ENST00000424339 LMBRD2Q68DH5 695 aaPredicted RBP7.51□□□□□ -1.21
EPHA4-206ENST00000424339 FAM109BQ6ICB4 259 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms