RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 AKAP13Q12802 2813 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 CCDC163A0A0D9SF12 145 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 GOLGA8IPA6NC78 632 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 C2orf78A6NCI8 922 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 MYMKA6NI61 221 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 GOLGA8JA6NMD2 632 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 GIPC1O14908 333 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 SLC26A4O43511 780 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 KCNK5O95279 499 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 PAX3P23760 479 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 DDIT3P35638 169 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 MPLP40238 635 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 SF3A1Q15459 793 aaKnown RBP12.61□□□□□ -0.39
PLOD3-204ENST00000424135 GAB4Q2WGN9 574 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 EML3Q32P44 896 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 SV2CQ496J9 727 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 INTS6LQ5JSJ4 861 aaKnown RBP12.61□□□□□ -0.39
PLOD3-204ENST00000424135 LMBRD2Q68DH5 695 aaPredicted RBP12.61□□□□□ -0.39
PLOD3-204ENST00000424135 ARL14EPQ8N8R7 260 aaPredicted RBP12.61□□□□□ -0.39
PLOD3-204ENST00000424135 MRPS31Q92665 395 aaKnown RBP12.61□□□□□ -0.39
PLOD3-204ENST00000424135 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 CBWD1Q9BRT8 395 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 DUS2Q9NX74 493 aaKnown RBP12.61□□□□□ -0.39
PLOD3-204ENST00000424135 GCNT4Q9P109 453 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 ANGPTL2Q9UKU9 493 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 CLIC4Q9Y696 253 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 PTPRJQ12913 1337 aa12.61□□□□□ -0.39
PLOD3-204ENST00000424135 TCHHQ07283 1943 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 BAHCC1Q9P281 2608 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 SCAMP3O14828 347 aaKnown RBP12.6□□□□□ -0.39
PLOD3-204ENST00000424135 EIF5BO60841 1220 aaKnown RBP12.6□□□□□ -0.39
PLOD3-204ENST00000424135 HNRNPLP14866 589 aaKnown RBP eCLIP12.6□□□□□ -0.39
PLOD3-204ENST00000424135 SCP2P22307 547 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 LMO2P25791 158 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 DDX6P26196 483 aaKnown RBP eCLIP12.6□□□□□ -0.39
PLOD3-204ENST00000424135 LONP1P36776 959 aaKnown RBP12.6□□□□□ -0.39
PLOD3-204ENST00000424135 TSPY1Q01534 308 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 MESP2Q0VG99 397 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 SMARCB1Q12824 385 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 USP4Q13107 963 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 DMC1Q14565 340 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 ZNF268Q14587 947 aaPredicted RBP12.6□□□□□ -0.39
PLOD3-204ENST00000424135 PDGFRLQ15198 375 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 RABEP1Q15276 862 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 SLFN12LQ6IEE8 588 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 CC2D1AQ6P1N0 951 aaPredicted RBP12.6□□□□□ -0.39
PLOD3-204ENST00000424135 BRSK2Q8IWQ3 736 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 RASSF8Q8NHQ8 419 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 OSCP1Q8WVF1 389 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 CLIC6Q96NY7 704 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 LSM14BQ9BX40 385 aaKnown RBP12.6□□□□□ -0.39
PLOD3-204ENST00000424135 KIF9Q9HAQ2 790 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 NME7Q9Y5B8 376 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 IGF2RP11717 2491 aa12.6□□□□□ -0.39
PLOD3-204ENST00000424135 ABCA7Q8IZY2 2146 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 C4orf47A7E2U8 309 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 PATE3B3GLJ2 98 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 ATG13O75143 517 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 AKAP3O75969 853 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 IL18RAPO95256 599 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 TOP3BO95985 862 aaKnown RBP12.59□□□□□ -0.39
PLOD3-204ENST00000424135 CKMP06732 381 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 CENPBP07199 599 aaPredicted RBP12.59□□□□□ -0.39
PLOD3-204ENST00000424135 CSH1P0DML2 217 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 CSH2P0DML3 217 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 DRD1P21728 446 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 BCKDHBP21953 392 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 USP46P62068 366 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 PSMC1P62191 440 aaKnown RBP12.59□□□□□ -0.39
PLOD3-204ENST00000424135 CREB5Q02930 508 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 FAM160A1Q05DH4 1040 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 PSMD2Q13200 908 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 PTPAQ15257 358 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 NFE2Q16621 373 aaPredicted RBP12.59□□□□□ -0.39
PLOD3-204ENST00000424135 SOWAHAQ2M3V2 549 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
PLOD3-204ENST00000424135 PSAPL1Q6NUJ1 521 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 SYT13Q7L8C5 426 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 SCN4BQ8IWT1 228 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 CAMKK1Q8N5S9 505 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 CSGALNACT2Q8N6G5 542 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 KRI1Q8N9T8 703 aaKnown RBP12.59□□□□□ -0.39
PLOD3-204ENST00000424135 GLIS3Q8NEA6 775 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 SH3RF2Q8TEC5 729 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 LEO1Q8WVC0 666 aaPredicted RBP12.59□□□□□ -0.39
PLOD3-204ENST00000424135 CD101Q93033 1021 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 MYRFLQ96LU7 910 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 ZNF560Q96MR9 790 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 ACBD6Q9BR61 282 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 MTMR12Q9C0I1 747 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 PCIF1Q9H4Z3 704 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 MRPL44Q9H9J2 332 aaKnown RBP12.59□□□□□ -0.39
PLOD3-204ENST00000424135 PDE11AQ9HCR9 933 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 CRTAC1Q9NQ79 661 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 FBXO2Q9UK22 296 aaPredicted RBP12.59□□□□□ -0.39
PLOD3-204ENST00000424135 KIF3AQ9Y496 699 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 SNX9Q9Y5X1 595 aa12.59□□□□□ -0.39
PLOD3-204ENST00000424135 ZNF638Q14966 1978 aaKnown RBP12.59□□□□□ -0.39
PLOD3-204ENST00000424135 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms