RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SNAPC2Q13487 334 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 MSS51Q4VC12 460 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
PTPRN-204ENST00000423636 CATSPER4Q7RTX7 472 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 OR6J1Q8NGC5 347 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 TMEM40Q8WWA1 233 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 TRIM6Q9C030 488 aaPredicted RBP12.56□□□□□ -0.4
PTPRN-204ENST00000423636 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTPRN-204ENST00000423636 DIS3Q9Y2L1 958 aaKnown RBP12.56□□□□□ -0.4
PTPRN-204ENST00000423636 MFHAS1Q9Y4C4 1052 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 ARID2Q68CP9 1835 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 GOLGA6L7A0A1B0GV03 622 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 TCP11X1B4DZS4 312 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 HBP1O60381 514 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 MIPP30301 263 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 HADHBP55084 474 aaKnown RBP12.56□□□□□ -0.4
PTPRN-204ENST00000423636 PDIA2Q13087 525 aaKnown RBP12.56□□□□□ -0.4
PTPRN-204ENST00000423636 BBS9Q3SYG4 887 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 BSPRYQ5W0U4 402 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 ZPBP2Q6X784 338 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 CD302Q8IX05 232 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 TCP11Q8WWU5 503 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 ADPGKQ9BRR6 497 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 FZD8Q9H461 694 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 TSPAN16Q9UKR8 245 aa12.56□□□□□ -0.4
PTPRN-204ENST00000423636 DNAJC25-GNG10A0A024R161 153 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 MTA2O94776 668 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 CELF2O95319 508 aaKnown RBP12.55□□□□□ -0.4
PTPRN-204ENST00000423636 PTPN11Q06124 597 aaPredicted RBP12.55□□□□□ -0.4
PTPRN-204ENST00000423636 KLF1Q13351 362 aaPredicted RBP12.55□□□□□ -0.4
PTPRN-204ENST00000423636 TMEM132DQ14C87 1099 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 GRIK4Q16099 956 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 SEC16BQ96JE7 1060 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 XPO6Q96QU8 1125 aaKnown RBP12.55□□□□□ -0.4
PTPRN-204ENST00000423636 PEBP4Q96S96 227 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 DPP3Q9NY33 737 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 IP6K2Q9UHH9 426 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 NEU2Q9Y3R4 380 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 NME7Q9Y5B8 376 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 TRIP12Q14669 1992 aaPredicted RBP12.55□□□□□ -0.4
PTPRN-204ENST00000423636 A0A1W2PPM1 405 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 E2F8A0AVK6 867 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 CLDN5O00501 218 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 ZC3H11AO75152 810 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTPRN-204ENST00000423636 MYCP01106 439 aaPredicted RBP12.55□□□□□ -0.4
PTPRN-204ENST00000423636 CDH6P55285 790 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 CA9Q16790 459 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 PMF1Q6P1K2 205 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 MAMDC4Q6UXC1 1216 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 TSHZ1Q6ZSZ6 1077 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 ADAM32Q8TC27 787 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 ZFP42Q96MM3 310 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 PTPRHQ9HD43 1115 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 BRCA1P38398 1863 aaKnown RBP12.55□□□□□ -0.4
PTPRN-204ENST00000423636 SLC25A27O95847 323 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 RARGP13631 454 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 BRAFP15056 766 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 PDGFRAP16234 1089 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 CORO7P57737 925 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 IFRD2Q12894 506 aaPredicted RBP12.55□□□□□ -0.4
PTPRN-204ENST00000423636 TFDP1Q14186 410 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 NUGGCQ68CJ6 796 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 MTHFD1LQ6UB35 978 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 LRIG3Q6UXM1 1119 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 PHF13Q86YI8 300 aaPredicted RBP12.55□□□□□ -0.4
PTPRN-204ENST00000423636 RUBCNQ92622 972 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 NAALADL1Q9UQQ1 740 aa12.55□□□□□ -0.4
PTPRN-204ENST00000423636 BHMG1C9JSJ3 638 aaPredicted RBP12.54□□□□□ -0.4
PTPRN-204ENST00000423636 I3L4J1 428 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 CXCL11O14625 94 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 PMM2O15305 246 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 TRAPPC3O43617 180 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 LIASO43766 372 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 KRT15P19012 456 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 PPIL2Q13356 520 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 GPR142Q7Z601 462 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 HOOK3Q86VS8 718 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 HASPINQ8TF76 798 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 FAM167AQ96KS9 214 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 ACAP3Q96P50 834 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 OSBPL7Q9BZF2 842 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 FLRT1Q9NZU1 646 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 PIN4Q9Y237 131 aaKnown RBP12.54□□□□□ -0.4
PTPRN-204ENST00000423636 PPP2R3BQ9Y5P8 575 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 ASAP2O43150 1006 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 TREHO43280 583 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 PIGRP01833 764 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 MAGEA4P43358 317 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 GOLGA7BQ2TAP0 167 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 FNBP1LQ5T0N5 605 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 MARCH8Q5T0T0 291 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 FAM183BPQ6ZVS7 135 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 RRAGCQ9HB90 399 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 AVENQ9NQS1 362 aaPredicted RBP12.54□□□□□ -0.4
PTPRN-204ENST00000423636 IL1RAPL1Q9NZN1 696 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 CHMP2BQ9UQN3 213 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms