RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 H0YIN7 160 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 MAGEC1O60732 1142 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 CBX6O95503 412 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 LINGO3P0C6S8 592 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 EIF2AK2P19525 551 aaKnown RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 NAMPTP43490 491 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 CCNHP51946 323 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 RAP1GDS1P52306 607 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 GPX6P59796 221 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 PLCB3Q01970 1234 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 SLC18A2Q05940 514 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ADCY1Q08828 1119 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 KPNB1Q14974 876 aaKnown RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 RBBP5Q15291 538 aaKnown RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 LGSNQ5TDP6 509 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ARHGEF16Q5VV41 709 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 KAZNQ674X7 775 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ATG16L1Q676U5 607 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 TRIM68Q6AZZ1 485 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 SESTD1Q86VW0 696 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ARHGAP18Q8N392 663 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ZNF483Q8TF39 744 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 MZB1Q8WU39 189 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 RSAD2Q8WXG1 361 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 NR1H4Q96RI1 486 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 RMDN3Q96TC7 470 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 TSC22D3Q99576 134 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 POLR3FQ9H1D9 316 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 TMEM134Q9H6X4 195 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 PNPLA8Q9NP80 782 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 CYP26B1Q9NR63 512 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 FBXO28Q9NVF7 368 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 KCNK4Q9NYG8 393 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 GABBR1Q9UBS5 961 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 GRID1Q9ULK0 1009 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 SORCS3Q9UPU3 1222 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 AGTPBP1Q9UPW5 1226 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 PPME1Q9Y570 386 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 IVNS1ABPQ9Y6Y0 642 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 SSC5DA1L4H1 1573 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ARID2Q68CP9 1835 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 TCP10L2B9ZVM9 353 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 I3L4J1 428 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 GSC2O15499 205 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 MAP3K7O43318 606 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 MED7O43513 233 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 LPXNO60711 386 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 VNN1O95497 513 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ESRRAP11474 423 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 GM2AP17900 193 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ADRA1DP25100 572 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 STIP1P31948 543 aaKnown RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 NEK3P51956 506 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 RPS6P62753 249 aaKnown RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 AP1B1Q10567 949 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 FASTKD3Q14CZ7 662 aaKnown RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 DNAL1Q4LDG9 190 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 RSBN1LQ6PCB5 846 aaPredicted RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 SLC30A9Q6PML9 568 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 C4orf22Q6V702 233 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 C3orf62Q6ZUJ4 267 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 WDR49Q8IV35 697 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 KIRREL3Q8IZU9 778 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 TCP10LQ8TDR4 215 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 DCAKDQ8WVC6 231 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ZNF606Q8WXB4 792 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 C7orf26Q96N11 449 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 MCEEQ96PE7 176 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 KIFC3Q9BVG8 833 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 CADM1Q9BY67 442 aaKnown RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 IQCGQ9H095 443 aaKnown RBP11.55□□□□□ -0.56
LIMS1-207ENST00000422797 KIF9Q9HAQ2 790 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 SLC24A3Q9HC58 644 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 PDP2Q9P2J9 529 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 HEY2Q9UBP5 337 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ZNF180Q9UJW8 692 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 ZNRF3Q9ULT6 936 aa11.55□□□□□ -0.56
LIMS1-207ENST00000422797 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 A0A1W2PPM1 405 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 CFAP69A5D8W1 941 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 MAGEA13PA6NCF6 341 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 PI4K2BG5E9Z4 385 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 APOC4-APOC2K7ER74 178 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 HGSO14964 777 aaPredicted RBP11.54□□□□□ -0.56
LIMS1-207ENST00000422797 MCF2LO15068 1137 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 CIB2O75838 187 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 STBD1O95210 358 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 PSMG1O95456 288 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
LIMS1-207ENST00000422797 IFNB1P01574 187 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 APOC2P02655 101 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 INHBAP08476 426 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 MYCLP12524 364 aaPredicted RBP11.54□□□□□ -0.56
LIMS1-207ENST00000422797 KRT10P13645 584 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 RFC5P40937 340 aa11.54□□□□□ -0.56
LIMS1-207ENST00000422797 SARNPP82979 210 aaKnown RBP11.54□□□□□ -0.56
LIMS1-207ENST00000422797 ZNF200P98182 395 aaPredicted RBP11.54□□□□□ -0.56
LIMS1-207ENST00000422797 ROR2Q01974 943 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms