RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 SEC62Q99442 399 aaKnown RBP5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 CD244Q9BZW8 370 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 NAPBQ9H115 298 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 CHMP4BQ9H444 224 aaKnown RBP5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 PCIF1Q9H4Z3 704 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 DCTPP1Q9H773 170 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 INCENPQ9NQS7 918 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 KCNH7Q9NS40 1196 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 TOMM22Q9NS69 142 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 IMPACTQ9P2X3 320 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 HDAC6Q9UBN7 1215 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 CTNNA3Q9UI47 895 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 STX8Q9UNK0 236 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 ANKRD6Q9Y2G4 727 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 RNF114Q9Y508 228 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 INSL6Q9Y581 213 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 ATP23Q9Y6H3 246 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZNF292O60281 2723 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 CACNA1AO00555 2505 aa5.35□□□□□ -1.55
CDC42EP3-202ENST00000422687 FRYLO94915 3013 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 RIF1Q5UIP0 2472 aaKnown RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 TECTAO75443 2155 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 TSPY2A6NKD2 308 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 B4DLN1 442 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 H3BNC9 293 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 SCDO00767 359 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 NRDCO43847 1150 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 H2AFYO75367 372 aaKnown RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 PAPLNO95428 1278 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 GH1P01241 217 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 LINC00271P0C7V0 271 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 MSL3P1P0C860 447 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 PF4V1P10720 104 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 PDHBP11177 359 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 TOP1P11387 765 aaKnown RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 CD40P25942 277 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 PTX3P26022 381 aaPredicted RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 CALML3P27482 149 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 GJA4P35212 333 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 MRPL12P52815 198 aaKnown RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 GHRHRQ02643 423 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZNF543Q08ER8 600 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 IKZF1Q13422 519 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 CCDC96Q2M329 555 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 EPC2Q52LR7 807 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 TIGD5Q53EQ6 642 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 HERC4Q5GLZ8 1057 aaPredicted RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 RALGPS1Q5JS13 557 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZNF618Q5T7W0 954 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 TSHZ3Q63HK5 1081 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 CPZQ66K79 652 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 FRMD7Q6ZUT3 714 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 BMP8AQ7Z5Y6 402 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 SERINC5Q86VE9 423 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 DGKHQ86XP1 1220 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 TPH2Q8IWU9 490 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 ADHFE1Q8IWW8 467 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZZZ3Q8IYH5 903 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 IWS1Q96ST2 819 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 MPHOSPH6Q99547 160 aaKnown RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 TMEM47Q9BQJ4 181 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 C17orf80Q9BSJ5 609 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 ZNF700Q9H0M5 742 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 ADAMTS10Q9H324 1103 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 ALG13Q9NP73 1137 aaKnown RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 CCM2LQ9NUG4 571 aaPredicted RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 OBP2AQ9NY56 170 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 USP36Q9P275 1121 aaKnown RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 TMEM59LQ9UK28 342 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 NOC2LQ9Y3T9 749 aaKnown RBP5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 TELO2Q9Y4R8 837 aa5.34□□□□□ -1.55
CDC42EP3-202ENST00000422687 GVINP1Q7Z2Y8 2422 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 ZMYM6O95789 1325 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 TTC41PQ6P2S7 1318 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 EMSYQ7Z589 1322 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 SALL3Q9BXA9 1300 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 C5orf67F2Z3F1 127 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 H3BQ06 376 aaPredicted RBP5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 NCK2O43639 380 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 PPFIA4O75335 1185 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 EIF3JO75822 258 aaKnown RBP5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 ZRANB2O95218 330 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 EFEMP2O95967 443 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 LTFP02788 710 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 AMHP03971 560 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 C4BPAP04003 597 aaKnown RBP5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 KRT18P05783 430 aaKnown RBP5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 MYL1P05976 194 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 RNASE1P07998 156 aaKnown RBP5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 GLI4P10075 376 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 CASTP20810 708 aaKnown RBP5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 LPOP22079 712 aaPredicted RBP5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 CCND1P24385 295 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 CD96P40200 585 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 SCAND1P57086 179 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 CHRNEQ04844 493 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 NR0B2Q15466 257 aa5.33□□□□□ -1.56
CDC42EP3-202ENST00000422687 DGKDQ16760 1214 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms