RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 CCDC15Q0P6D6 951 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 OVGP1Q12889 678 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 PRKG1Q13976 671 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 NAA25Q14CX7 972 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 CEP128Q6ZU80 1094 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 C3orf62Q6ZUJ4 267 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 OTOAQ7RTW8 1153 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 RPAINQ86UA6 219 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 WDR49Q8IV35 697 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 THNSL1Q8IYQ7 743 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 NPHS2Q9NP85 383 aa16.6■□□□□ 0.25
CDH1-202ENST00000422392 ANK1P16157 1881 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 ATP2A1O14983 1001 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 MSCO60682 206 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 STAM2O75886 525 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 TMEM63AO94886 807 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 CCND1P24385 295 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 CDH8P55286 799 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 GEMIN4P57678 1058 aaKnown RBP16.59■□□□□ 0.25
CDH1-202ENST00000422392 TRPC3Q13507 836 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 BBS9Q3SYG4 887 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 PLEKHG4Q58EX7 1191 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 UNC45BQ8IWX7 931 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 FBXO36Q8NEA4 188 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 C10orf82Q8WW14 230 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 ZNF75CPQ92670 426 aaPredicted RBP16.59■□□□□ 0.25
CDH1-202ENST00000422392 ZBTB10Q96DT7 871 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 ZNF570Q96NI8 536 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 PAFAH2Q99487 392 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 DCTN4Q9UJW0 460 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 SMG5Q9UPR3 1016 aaKnown RBP16.59■□□□□ 0.25
CDH1-202ENST00000422392 GJA3Q9Y6H8 435 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 SPDYE16A6NNV3 312 aaPredicted RBP16.59■□□□□ 0.25
CDH1-202ENST00000422392 T-ENOLP0DO92 83 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 KRT3P12035 628 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 RPL22P35268 128 aaKnown RBP16.59■□□□□ 0.25
CDH1-202ENST00000422392 ASPAP45381 313 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 OAZ1P54368 228 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 ATP11AP98196 1134 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 ZNF699Q32M78 642 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 EFHC2Q5JST6 749 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 TRIM50Q86XT4 487 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 RSRC1Q96IZ7 334 aaKnown RBP16.59■□□□□ 0.25
CDH1-202ENST00000422392 TXLNGQ9NUQ3 528 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 NKX1-2Q9UD57 310 aaPredicted RBP16.59■□□□□ 0.25
CDH1-202ENST00000422392 AFG3L2Q9Y4W6 797 aa16.59■□□□□ 0.25
CDH1-202ENST00000422392 LSM8O95777 96 aaKnown RBP16.58■□□□□ 0.25
CDH1-202ENST00000422392 CATSPERGQ6ZRH7 1159 aa16.58■□□□□ 0.25
CDH1-202ENST00000422392 FAM71DQ8N9W8 422 aa16.58■□□□□ 0.25
CDH1-202ENST00000422392 RNF149Q8NC42 400 aa16.58■□□□□ 0.25
CDH1-202ENST00000422392 TCP10LQ8TDR4 215 aa16.58■□□□□ 0.25
CDH1-202ENST00000422392 NIFKQ9BYG3 293 aaKnown RBP16.58■□□□□ 0.25
CDH1-202ENST00000422392 TMEM134Q9H6X4 195 aa16.58■□□□□ 0.25
CDH1-202ENST00000422392 METTL5Q9NRN9 209 aaKnown RBP16.58■□□□□ 0.25
CDH1-202ENST00000422392 DDX56Q9NY93 547 aaKnown RBP16.58■□□□□ 0.25
CDH1-202ENST00000422392 SLC17A7Q9P2U7 560 aa16.58■□□□□ 0.25
CDH1-202ENST00000422392 KCNG1Q9UIX4 513 aa16.58■□□□□ 0.25
CDH1-202ENST00000422392 TOM1L1O75674 476 aa16.58■□□□□ 0.24
CDH1-202ENST00000422392 KRT19P08727 400 aa16.58■□□□□ 0.24
CDH1-202ENST00000422392 SKIV2L2P42285 1042 aaKnown RBP16.58■□□□□ 0.24
CDH1-202ENST00000422392 GMPSP49915 693 aaPredicted RBP16.58■□□□□ 0.24
CDH1-202ENST00000422392 ZNF280AP59817 542 aaPredicted RBP16.58■□□□□ 0.24
CDH1-202ENST00000422392 TARBP2Q15633 366 aaKnown RBP16.58■□□□□ 0.24
CDH1-202ENST00000422392 RSAD2Q8WXG1 361 aa16.58■□□□□ 0.24
CDH1-202ENST00000422392 HSPH1Q92598 858 aa16.58■□□□□ 0.24
CDH1-202ENST00000422392 CPXM1Q96SM3 734 aa16.58■□□□□ 0.24
CDH1-202ENST00000422392 AS3MTQ9HBK9 375 aa16.58■□□□□ 0.24
CDH1-202ENST00000422392 SLC24A2Q9UI40 661 aa16.58■□□□□ 0.24
CDH1-202ENST00000422392 A0A1B0GUA9 196 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 PIK3R2O00459 728 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 FARP2O94887 1054 aaPredicted RBP16.57■□□□□ 0.24
CDH1-202ENST00000422392 EIF4BP23588 611 aaKnown RBP16.57■□□□□ 0.24
CDH1-202ENST00000422392 EPHB2P29323 1055 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 STAT5BP51692 787 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 BASP1P80723 227 aaKnown RBP16.57■□□□□ 0.24
CDH1-202ENST00000422392 DUOXA2Q1HG44 320 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 SGSM1Q2NKQ1 1148 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 RAB6CQ53S08 254 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 TAF1BQ53T94 588 aaPredicted RBP16.57■□□□□ 0.24
CDH1-202ENST00000422392 PPP1R2P3Q6NXS1 205 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 PPIL6Q8IXY8 311 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 TMEM192Q8IY95 271 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 NAT8LQ8N9F0 302 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 SLC7A6OSQ96CW6 309 aaPredicted RBP16.57■□□□□ 0.24
CDH1-202ENST00000422392 ACO2Q99798 780 aaKnown RBP16.57■□□□□ 0.24
CDH1-202ENST00000422392 RAB6CQ9H0N0 254 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 GINM1Q9NU53 330 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 SENP1Q9P0U3 644 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 CHMP2BQ9UQN3 213 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 CEP83Q9Y592 693 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 SNCAIPQ9Y6H5 919 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 EIF4E1BA6NMX2 242 aaKnown RBP16.57■□□□□ 0.24
CDH1-202ENST00000422392 HOXC6P09630 235 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 ATP2A2P16615 1042 aaKnown RBP16.57■□□□□ 0.24
CDH1-202ENST00000422392 GM2AP17900 193 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 KDELR1P24390 212 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 PTPN7P35236 360 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 TCF7P36402 384 aaPredicted RBP16.57■□□□□ 0.24
CDH1-202ENST00000422392 PSMC1P62191 440 aaKnown RBP16.57■□□□□ 0.24
CDH1-202ENST00000422392 NPNTQ6UXI9 565 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms