RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 ZIM2Q9NZV7 527 aa5.09□□□□□ -1.59
LINC00397-201ENST00000422074 XPR1Q9UBH6 696 aa5.09□□□□□ -1.59
LINC00397-201ENST00000422074 SHOC2Q9UQ13 582 aa5.09□□□□□ -1.59
LINC00397-201ENST00000422074 ZNF213O14771 459 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 PRKCGP05129 697 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 PDHA1P08559 390 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 IL6RP08887 468 aaPredicted RBP5.08□□□□□ -1.6
LINC00397-201ENST00000422074 FAM163BP0C2L3 166 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 U2AF1L5P0DN76 240 aaPredicted RBP5.08□□□□□ -1.6
LINC00397-201ENST00000422074 NPR1P16066 1061 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 LRPAP1P30533 357 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 ALDH9A1P49189 494 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 SLC11A2P49281 568 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 ATXN1P54253 815 aaKnown RBP5.08□□□□□ -1.6
LINC00397-201ENST00000422074 UCP3P55916 312 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 LILRA4P59901 499 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 U2AF1Q01081 240 aaKnown RBP eCLIP5.08□□□□□ -1.6
LINC00397-201ENST00000422074 TFF2Q03403 129 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 AARS2Q5JTZ9 985 aaKnown RBP5.08□□□□□ -1.6
LINC00397-201ENST00000422074 KIAA1614Q5VZ46 1190 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 LAYNQ6UX15 382 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 DAAM2Q86T65 1068 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 GAS2L3Q86XJ1 694 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 SEMA6DQ8NFY4 1073 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 PPP1R35Q8TAP8 253 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 TTYH3Q9C0H2 523 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 DLL3Q9NYJ7 618 aa5.08□□□□□ -1.6
LINC00397-201ENST00000422074 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.08□□□□□ -1.6
LINC00397-201ENST00000422074 TARM1B6A8C7 271 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 TJP3O95049 919 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 XRCC6P12956 609 aaKnown RBP eCLIP5.07□□□□□ -1.6
LINC00397-201ENST00000422074 LIPAP38571 399 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 E2F2Q14209 437 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 NFE2Q16621 373 aaPredicted RBP5.07□□□□□ -1.6
LINC00397-201ENST00000422074 PLEKHG6Q3KR16 790 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 LRCH2Q5VUJ6 765 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 CEP85Q6P2H3 762 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 OVCH2Q7RTZ1 564 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 AMIGO2Q86SJ2 522 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 PCSK9Q8NBP7 692 aaKnown RBP5.07□□□□□ -1.6
LINC00397-201ENST00000422074 ATG4AQ8WYN0 398 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 REPS1Q96D71 796 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 TMEM60Q9H2L4 133 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 FLRT1Q9NZU1 646 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 SERGEFQ9UGK8 458 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 CPA4Q9UI42 421 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 NDRG4Q9ULP0 352 aaKnown RBP5.07□□□□□ -1.6
LINC00397-201ENST00000422074 PADI4Q9UM07 663 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 TMX2Q9Y320 296 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 SHROOM4Q9ULL8 1493 aa5.07□□□□□ -1.6
LINC00397-201ENST00000422074 LOC105371045A0A1W2PR82 267 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 H0YIZ8 118 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 JTBO76095 146 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 LATS1O95835 1130 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 CSF1RP07333 972 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 HNRNPCP07910 306 aaKnown RBP eCLIP5.06□□□□□ -1.6
LINC00397-201ENST00000422074 EBLN1P0CF75 366 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 EN2P19622 333 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-201ENST00000422074 SP2Q02086 613 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 FAM102BQ5T8I3 360 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 ARHGAP40Q5TG30 622 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 NXNQ6DKJ4 435 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 SUMO4Q6EEV6 95 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 RGS7BPQ6MZT1 257 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-201ENST00000422074 ZBTB34Q8NCN2 500 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 RP9Q8TA86 221 aaKnown RBP5.06□□□□□ -1.6
LINC00397-201ENST00000422074 P2RX7Q99572 595 aaKnown RBP5.06□□□□□ -1.6
LINC00397-201ENST00000422074 SMURF2Q9HAU4 748 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 ATP6V0A4Q9HBG4 840 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 RGS17Q9UGC6 210 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-201ENST00000422074 SERTAD3Q9UJW9 196 aa5.06□□□□□ -1.6
LINC00397-201ENST00000422074 LINC01548A6NM66 108 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 MYO1FO00160 1098 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 PHGDHO43175 533 aaKnown RBP5.05□□□□□ -1.6
LINC00397-201ENST00000422074 CELA2AP08217 269 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 CDK4P11802 303 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 NDUFB7P17568 137 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 DGKEP52429 567 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 MYO1EQ12965 1108 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 EIF2B5Q13144 721 aaKnown RBP5.05□□□□□ -1.6
LINC00397-201ENST00000422074 ODR4Q5SWX8 454 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 TREML2Q5T2D2 321 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 NPNTQ6UXI9 565 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 MAEAQ7L5Y9 396 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 ZNF804AQ7Z570 1209 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 RAVER1Q8IY67 606 aaKnown RBP5.05□□□□□ -1.6
LINC00397-201ENST00000422074 TCEAL8Q8IYN2 117 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 KIAA0319LQ8IZA0 1049 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 DNAJC5GQ8N7S2 189 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 LRGUKQ96M69 825 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 NT5C1BQ96P26 610 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 ZMAT3Q9HA38 289 aaKnown RBP5.05□□□□□ -1.6
LINC00397-201ENST00000422074 DUSP22Q9NRW4 184 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.05□□□□□ -1.6
LINC00397-201ENST00000422074 STAP2Q9UGK3 403 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 L1RE1Q9UN81 338 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 GABRQQ9UN88 632 aa5.05□□□□□ -1.6
LINC00397-201ENST00000422074 A0A1W2PPL8 197 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 A1L4Q6 167 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 MANSC4A6NHS7 340 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms