RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 PRMT1Q99873 361 aaKnown RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 C16orf70Q9BSU1 422 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 MAF1Q9H063 256 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 VPS37BQ9H9H4 285 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 HCRTO43612 131 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 RNF8O76064 485 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 LSM8O95777 96 aaKnown RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 NUDT17P0C025 328 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 IVDP26440 423 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 MAN1A1P33908 653 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 AUHQ13825 339 aaKnown RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 PIGHQ14442 188 aaPredicted RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 C15orf59Q2T9L4 293 aaPredicted RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 ZC3H18Q86VM9 953 aaKnown RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 ANKMY2Q8IV38 441 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 CCDC33Q8N5R6 958 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 UBR7Q8N806 425 aa11.53□□□□□ -0.56
DDX56-203ENST00000421223 NGRNQ9NPE2 291 aaKnown RBP11.53□□□□□ -0.56
DDX56-203ENST00000421223 GLTPD2A6NH11 291 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 TP73O15350 636 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 CELF2O95319 508 aaKnown RBP11.52□□□□□ -0.56
DDX56-203ENST00000421223 ITGBL1O95965 494 aaPredicted RBP11.52□□□□□ -0.56
DDX56-203ENST00000421223 TNFAIP2Q03169 654 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 MMRN1Q13201 1228 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 GRM1Q13255 1194 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 HADHQ16836 314 aaKnown RBP11.52□□□□□ -0.56
DDX56-203ENST00000421223 TFDP3Q5H9I0 405 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 LDLRAD1Q5T700 205 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 SRRM1Q8IYB3 904 aaKnown RBP11.52□□□□□ -0.56
DDX56-203ENST00000421223 OR6B3Q8NGW1 331 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 ACTL9Q8TC94 416 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 C18orf25Q96B23 403 aaPredicted RBP11.52□□□□□ -0.56
DDX56-203ENST00000421223 PIWIL1Q96J94 861 aaKnown RBP11.52□□□□□ -0.56
DDX56-203ENST00000421223 CABS1Q96KC9 395 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 HOMER3Q9NSC5 361 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 GPATCH2LQ9NWQ4 482 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 PAPPA2Q9BXP8 1791 aa11.52□□□□□ -0.56
DDX56-203ENST00000421223 LIASO43766 372 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 TSPAN1O60635 241 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 LRCH4O75427 683 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 TTC4O95801 387 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 FAM107AO95990 144 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 MCF2P10911 925 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 P4HA1P13674 534 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 OTUD4Q01804 1114 aaKnown RBP11.52□□□□□ -0.57
DDX56-203ENST00000421223 ACVR2BQ13705 512 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 FASTKD3Q14CZ7 662 aaKnown RBP11.52□□□□□ -0.57
DDX56-203ENST00000421223 PPTC7Q8NI37 304 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 XPO6Q96QU8 1125 aaKnown RBP11.52□□□□□ -0.57
DDX56-203ENST00000421223 EIF2AQ9BY44 585 aaKnown RBP11.52□□□□□ -0.57
DDX56-203ENST00000421223 NINJ2Q9NZG7 142 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 STRIP2Q9ULQ0 834 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 NEU2Q9Y3R4 380 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 PTPRFP10586 1907 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 E5RJQ4 531 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 ADCY6O43306 1168 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 PDGFRAP16234 1089 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 ZNF200P98182 395 aaPredicted RBP11.52□□□□□ -0.57
DDX56-203ENST00000421223 TMED2Q15363 201 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 MAMDC4Q6UXC1 1216 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 SCUBE3Q8IX30 993 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 NPLOC4Q8TAT6 608 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 RSAD2Q8WXG1 361 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 TINF2Q9BSI4 451 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 VTA1Q9NP79 307 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 TSPAN16Q9UKR8 245 aa11.52□□□□□ -0.57
DDX56-203ENST00000421223 hCG_1818297A0A087WSY0 165 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 TRAPPC3O43617 180 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 PECAM1P16284 738 aaPredicted RBP11.51□□□□□ -0.57
DDX56-203ENST00000421223 MIPP30301 263 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 MAGEA4P43358 317 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 RBP5P82980 135 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 BEX3Q00994 111 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 GAD2Q05329 585 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 DGKDQ16760 1214 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 C1orf228Q6PIY5 440 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 TRMT10CQ7L0Y3 403 aaKnown RBP11.51□□□□□ -0.57
DDX56-203ENST00000421223 EXOC3L1Q86VI1 746 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 ZBED8Q8IZ13 594 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 ARFGAP1Q8N6T3 406 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 TLCD1Q96CP7 247 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 MAML3Q96JK9 1138 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 MAK16Q9BXY0 300 aaKnown RBP11.51□□□□□ -0.57
DDX56-203ENST00000421223 ZNF518BQ9C0D4 1074 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 GGT7Q9UJ14 662 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 PPME1Q9Y570 386 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 GOLGA6L7A0A1B0GV03 622 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 SIGLEC16A6NMB1 481 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 CILPO75339 1184 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 CYP2B6P20813 491 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 ADORA2BP29275 332 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 GTF2A2P52657 109 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 CDH6P55285 790 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 ZKSCAN8Q15776 578 aaPredicted RBP11.51□□□□□ -0.57
DDX56-203ENST00000421223 NPNTQ6UXI9 565 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 XYLT1Q86Y38 959 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 SHCBP1Q8NEM2 672 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 DNAJB3Q8WWF6 145 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 MS4A4AQ96JQ5 239 aa11.51□□□□□ -0.57
DDX56-203ENST00000421223 MRPL45Q9BRJ2 306 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms