RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 PATE3B3GLJ2 98 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 ATP2C2O75185 946 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 PPP1R37O75864 691 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 ITGB3P05106 788 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 C1QTNF9P0C862 333 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 HNRNPLP14866 589 aaKnown RBP eCLIP13.86□□□□□ -0.19
LINC00339-203ENST00000420503 UBA7P41226 1012 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 SEC13P55735 322 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 TFAMQ00059 246 aaKnown RBP13.86□□□□□ -0.19
LINC00339-203ENST00000420503 CREB5Q02930 508 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 PSMD2Q13200 908 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 MTF1Q14872 753 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 GAB4Q2WGN9 574 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 ARL6IP4Q66PJ3 421 aaKnown RBP13.86□□□□□ -0.19
LINC00339-203ENST00000420503 ARL14EPQ8N8R7 260 aaPredicted RBP13.86□□□□□ -0.19
LINC00339-203ENST00000420503 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 FAM213AQ9BRX8 229 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 ECT2Q9H8V3 914 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 DDX43Q9NXZ2 648 aaKnown RBP13.86□□□□□ -0.19
LINC00339-203ENST00000420503 KCNG1Q9UIX4 513 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 GTF3C4Q9UKN8 822 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 DSEQ9UL01 958 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 AGAP1Q9UPQ3 857 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 PTPRJQ12913 1337 aa13.86□□□□□ -0.19
LINC00339-203ENST00000420503 HELZP42694 1942 aaKnown RBP13.86□□□□□ -0.19
LINC00339-203ENST00000420503 FAM208BQ5VWN6 2430 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 C4orf47A7E2U8 309 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 NOL4O94818 638 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 USP4Q13107 963 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 DMC1Q14565 340 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 EML3Q32P44 896 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 INTS6LQ5JSJ4 861 aaKnown RBP13.85□□□□□ -0.19
LINC00339-203ENST00000420503 RNF43Q68DV7 783 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 RASSF8Q8NHQ8 419 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 C2orf15Q8WU43 125 aaKnown RBP13.85□□□□□ -0.19
LINC00339-203ENST00000420503 LARP4BQ92615 738 aaKnown RBP13.85□□□□□ -0.19
LINC00339-203ENST00000420503 MRPS31Q92665 395 aaKnown RBP13.85□□□□□ -0.19
LINC00339-203ENST00000420503 LOXL4Q96JB6 756 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 ZC3H10Q96K80 434 aaKnown RBP13.85□□□□□ -0.19
LINC00339-203ENST00000420503 TSPAN18Q96SJ8 248 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 EDEM2Q9BV94 578 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 LSM14BQ9BX40 385 aaKnown RBP13.85□□□□□ -0.19
LINC00339-203ENST00000420503 STRA6Q9BX79 667 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 ZDHHC4Q9NPG8 344 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 DUS2Q9NX74 493 aaKnown RBP13.85□□□□□ -0.19
LINC00339-203ENST00000420503 GCNT4Q9P109 453 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 SIX4Q9UIU6 781 aa13.85□□□□□ -0.19
LINC00339-203ENST00000420503 MYO18AQ92614 2054 aaKnown RBP13.84□□□□□ -0.19
LINC00339-203ENST00000420503 CCDC163A0A0D9SF12 145 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 MYMKA6NI61 221 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 H3BQV1 296 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 DDIT3P35638 169 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 USP46P62068 366 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 PSMC1P62191 440 aaKnown RBP13.84□□□□□ -0.19
LINC00339-203ENST00000420503 SF3A1Q15459 793 aaKnown RBP13.84□□□□□ -0.19
LINC00339-203ENST00000420503 SV2CQ496J9 727 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 CC2D1AQ6P1N0 951 aaPredicted RBP13.84□□□□□ -0.19
LINC00339-203ENST00000420503 ZNF720Q7Z2F6 126 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 SCN4BQ8IWT1 228 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 DCP1BQ8IZD4 617 aaKnown RBP13.84□□□□□ -0.19
LINC00339-203ENST00000420503 CCDC33Q8N5R6 958 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 FRMD1Q8N878 549 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 GLIS3Q8NEA6 775 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 SH3RF2Q8TEC5 729 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 NOC3LQ8WTT2 800 aaKnown RBP13.84□□□□□ -0.19
LINC00339-203ENST00000420503 OSCP1Q8WVF1 389 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 AK8Q96MA6 479 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 CBWD1Q9BRT8 395 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 NME7Q9Y5B8 376 aa13.84□□□□□ -0.19
LINC00339-203ENST00000420503 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.84□□□□□ -0.19
LINC00339-203ENST00000420503 AKAP13Q12802 2813 aa13.83□□□□□ -0.19
LINC00339-203ENST00000420503 LNP1A1A4G5 178 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 BCLAF3A2AJT9 711 aaKnown RBP13.83□□□□□ -0.2
LINC00339-203ENST00000420503 ATG13O75143 517 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 APBB3O95704 486 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 CKMP06732 381 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 CSH1P0DML2 217 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 CSH2P0DML3 217 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
LINC00339-203ENST00000420503 HOXB3P14651 431 aaPredicted RBP13.83□□□□□ -0.2
LINC00339-203ENST00000420503 DRD1P21728 446 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 LMO2P25791 158 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 GBP1P32455 592 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 OPRD1P41143 372 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 NOVA1P51513 510 aaKnown RBP13.83□□□□□ -0.2
LINC00339-203ENST00000420503 DGKEP52429 567 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 SHC2P98077 582 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 TSPY1Q01534 308 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 FAM160A1Q05DH4 1040 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 ZNF268Q14587 947 aaPredicted RBP13.83□□□□□ -0.2
LINC00339-203ENST00000420503 PDGFRLQ15198 375 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 C2orf27AQ580R0 203 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 FAM173BQ6P4H8 233 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 SYT13Q7L8C5 426 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 BRSK2Q8IWQ3 736 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 CPA6Q8N4T0 437 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 KCTD17Q8N5Z5 321 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 CD101Q93033 1021 aa13.83□□□□□ -0.2
LINC00339-203ENST00000420503 DNAJC19Q96DA6 116 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms