RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 EML3Q32P44 896 aa15.34■□□□□ 0.05
NFE4-201ENST00000420058 FBXO43Q4G163 708 aa15.34■□□□□ 0.05
NFE4-201ENST00000420058 DCP1BQ8IZD4 617 aaKnown RBP15.34■□□□□ 0.05
NFE4-201ENST00000420058 PDCL2Q8N4E4 241 aa15.34■□□□□ 0.05
NFE4-201ENST00000420058 ZSWIM2Q8NEG5 633 aa15.34■□□□□ 0.05
NFE4-201ENST00000420058 OSCP1Q8WVF1 389 aa15.34■□□□□ 0.05
NFE4-201ENST00000420058 ST6GALNAC4Q9H4F1 302 aa15.34■□□□□ 0.05
NFE4-201ENST00000420058 GCNT4Q9P109 453 aa15.34■□□□□ 0.05
NFE4-201ENST00000420058 INVSQ9Y283 1065 aa15.34■□□□□ 0.05
NFE4-201ENST00000420058 ZNF638Q14966 1978 aaKnown RBP15.33■□□□□ 0.05
NFE4-201ENST00000420058 LNP1A1A4G5 178 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 PRPF40AO75400 957 aaKnown RBP15.33■□□□□ 0.04
NFE4-201ENST00000420058 FAM13AO94988 1023 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 APBB3O95704 486 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 CSH1P0DML2 217 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 CSH2P0DML3 217 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 CHRM1P11229 460 aaPredicted RBP15.33■□□□□ 0.04
NFE4-201ENST00000420058 AMPD2Q01433 879 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 POU5F1Q01860 360 aaKnown RBP15.33■□□□□ 0.04
NFE4-201ENST00000420058 CREB5Q02930 508 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 FAM160A1Q05DH4 1040 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 MTF1Q14872 753 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 GAB4Q2WGN9 574 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 ADALQ6DHV7 355 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 KDF1Q8NAX2 398 aaPredicted RBP15.33■□□□□ 0.04
NFE4-201ENST00000420058 MRPS31Q92665 395 aaKnown RBP15.33■□□□□ 0.04
NFE4-201ENST00000420058 CD101Q93033 1021 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 CDK5RAP3Q96JB5 506 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 FAM84AQ96KN4 292 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 EDEM2Q9BV94 578 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 STRA6Q9BX79 667 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 DUS2Q9NX74 493 aaKnown RBP15.33■□□□□ 0.04
NFE4-201ENST00000420058 AGO2Q9UKV8 859 aaKnown RBP15.33■□□□□ 0.04
NFE4-201ENST00000420058 L1RE1Q9UN81 338 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 MAGED2Q9UNF1 606 aaPredicted RBP15.33■□□□□ 0.04
NFE4-201ENST00000420058 WNT6Q9Y6F9 365 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 OBSL1O75147 1896 aa15.33■□□□□ 0.04
NFE4-201ENST00000420058 K7EQS6 105 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 SLC26A4O43511 780 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 HCRTO43612 131 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 PPP1R37O75864 691 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 RHOBTB1O94844 696 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 SPINK2P20155 84 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 NOVA1P51513 510 aaKnown RBP15.32■□□□□ 0.04
NFE4-201ENST00000420058 USP4Q13107 963 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 MCTP1Q6DN14 999 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 CC2D1AQ6P1N0 951 aaPredicted RBP15.32■□□□□ 0.04
NFE4-201ENST00000420058 ZNF720Q7Z2F6 126 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 OSTM1Q86WC4 334 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 RASSF3Q86WH2 238 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 USP33Q8TEY7 942 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 LEO1Q8WVC0 666 aaPredicted RBP15.32■□□□□ 0.04
NFE4-201ENST00000420058 RAD54LQ92698 747 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 TRMT2BQ96GJ1 504 aaKnown RBP15.32■□□□□ 0.04
NFE4-201ENST00000420058 ACBD6Q9BR61 282 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 ZMIZ1Q9ULJ6 1067 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 NUP205Q92621 2012 aa15.32■□□□□ 0.04
NFE4-201ENST00000420058 C2orf78A6NCI8 922 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 PATE3B3GLJ2 98 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 ABCB7O75027 752 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 HOXB3P14651 431 aaPredicted RBP15.31■□□□□ 0.04
NFE4-201ENST00000420058 HNRNPLP14866 589 aaKnown RBP eCLIP15.31■□□□□ 0.04
NFE4-201ENST00000420058 PLCG1P19174 1290 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 BCKDHBP21953 392 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 ACAT1P24752 427 aaKnown RBP15.31■□□□□ 0.04
NFE4-201ENST00000420058 OPRD1P41143 372 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 KCNA1Q09470 495 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 KARSQ15046 597 aaKnown RBP15.31■□□□□ 0.04
NFE4-201ENST00000420058 ELF2Q15723 593 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 NFE2Q16621 373 aaPredicted RBP15.31■□□□□ 0.04
NFE4-201ENST00000420058 PMS2CLQ68D20 193 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 SLFN12LQ6IEE8 588 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 UNQ6494/PRO21346Q6UXR6 183 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 CPA6Q8N4T0 437 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 ARL14EPQ8N8R7 260 aaPredicted RBP15.31■□□□□ 0.04
NFE4-201ENST00000420058 C1orf127Q8N9H9 656 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 AK8Q96MA6 479 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 TMEM206Q9H813 350 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 ABCB6Q9NP58 842 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 GTF3C4Q9UKN8 822 aa15.31■□□□□ 0.04
NFE4-201ENST00000420058 SMG1Q96Q15 3661 aaKnown RBP15.3■□□□□ 0.04
NFE4-201ENST00000420058 GABRDO14764 452 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 TCF3P15923 654 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 DGKEP52429 567 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 IRX4P78413 519 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 TSPY1Q01534 308 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 MESP2Q0VG99 397 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 SV2CQ496J9 727 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 INTS6LQ5JSJ4 861 aaKnown RBP15.3■□□□□ 0.04
NFE4-201ENST00000420058 SH3PXD2AQ5TCZ1 1133 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 LIMS2Q7Z4I7 341 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 SFTPA1Q8IWL2 248 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 OLIG1Q8TAK6 271 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 SH3RF2Q8TEC5 729 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 ZHX3Q9H4I2 956 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 DDX43Q9NXZ2 648 aaKnown RBP15.3■□□□□ 0.04
NFE4-201ENST00000420058 MYO16Q9Y6X6 1858 aa15.3■□□□□ 0.04
NFE4-201ENST00000420058 THADAQ6YHU6 1953 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 ANAPC1Q9H1A4 1944 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms