RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 NCAPD3P42695 1498 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 TNNT2P45379 298 aaPredicted RBP4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 RAB1AP62820 205 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 TFF2Q03403 129 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 DYRK1AQ13627 763 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 HLXQ14774 488 aaPredicted RBP4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 ANO6Q4KMQ2 910 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 FAM160B1Q5W0V3 765 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 B3GNT9Q6UX72 402 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 PPP1R3BQ86XI6 285 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 RAVER1Q8IY67 606 aaKnown RBP4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 SMAP1Q8IYB5 467 aaPredicted RBP4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 ZBTB34Q8NCN2 500 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 SEMA6DQ8NFY4 1073 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 FRAT1Q92837 279 aaPredicted RBP4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 FCRL4Q96PJ5 515 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 ACO2Q99798 780 aaKnown RBP4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 TINAGL1Q9GZM7 467 aaPredicted RBP4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 ARMT1Q9H993 441 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 CPA4Q9UI42 421 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 PRDM4Q9UKN5 801 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 PADI4Q9UM07 663 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 ST3GAL5Q9UNP4 418 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 LAS1LQ9Y4W2 734 aaKnown RBP4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 PAXBP1Q9Y5B6 917 aa4.08□□□□□ -1.76
SDCBPP3-201ENST00000419629 CUX2O14529 1486 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 SPATA31A3Q5VYP0 1347 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 CAPN8A6NHC0 703 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 LINC00473A8K010 186 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 M0QYG6 137 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 MYO1CO00159 1063 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 TRIAP1O43715 76 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 URI1O94763 535 aaPredicted RBP4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 AHSGP02765 367 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 IGKV2-30P06310 120 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 THP07101 528 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 PHKA1P46020 1223 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 CCT4P50991 539 aaKnown RBP4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 SOX8P57073 446 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 LRRC41Q15345 812 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 TXNRD1Q16881 649 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 TMEM119Q4V9L6 283 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 LAYNQ6UX15 382 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 USP37Q86T82 979 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 ANP32BQ92688 251 aaKnown RBP4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 RUNDC1Q96C34 613 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 TMEM60Q9H2L4 133 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 PRDM11Q9NQV5 511 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 ANLNQ9NQW6 1124 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 CTTNBP2NLQ9P2B4 639 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 KLHL42Q9P2K6 505 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 GABBR1Q9UBS5 961 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 PCDHA6Q9UN73 950 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 TBC1D30Q9Y2I9 924 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 PLEKHM1Q9Y4G2 1056 aa4.07□□□□□ -1.76
SDCBPP3-201ENST00000419629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 A0A0B4J269 797 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 WDR27A2RRH5 827 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 LINC01548A6NM66 108 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 VWC2LB2RUY7 222 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 E9PLN8 166 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 F5H697 171 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 PHGDHO43175 533 aaKnown RBP4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 TUSC2O75896 110 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 SUN1O94901 812 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 PRR35P0CG20 571 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 PIM1P11309 404 aaPredicted RBP4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 XRCC6P12956 609 aaKnown RBP eCLIP4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 ATF3P18847 181 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 NPTX2P47972 431 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 AGFG1P52594 562 aaKnown RBP4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 CACNB3P54284 484 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 TUBA4AP68366 448 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 EXOSC9Q06265 439 aaKnown RBP4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 TCF15Q12870 199 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 TUBB3Q13509 450 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 GPR162Q16538 588 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 CD300EQ496F6 205 aaPredicted RBP4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 SLC44A4Q53GD3 710 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 TAF3Q5VWG9 929 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 SRGAP1Q7Z6B7 1085 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 RASAL3Q86YV0 1011 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 ADGRG5Q8IZF4 528 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 PCSK9Q8NBP7 692 aaKnown RBP4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 PSD4Q8NDX1 1056 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 PPP1R35Q8TAP8 253 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 MYCBPAPQ8TBZ2 947 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 POC1BQ8TC44 478 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 KBTBD7Q8WVZ9 684 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 RPL36ALQ969Q0 106 aaKnown RBP4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 SUCLG2Q96I99 432 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 VKORC1Q9BQB6 163 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 BRIP1Q9BX63 1249 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 RAD54BQ9Y620 910 aa4.06□□□□□ -1.76
SDCBPP3-201ENST00000419629 KIF20AO95235 890 aa4.05□□□□□ -1.76
SDCBPP3-201ENST00000419629 GRPP07492 148 aa4.05□□□□□ -1.76
SDCBPP3-201ENST00000419629 HMGB1P09429 215 aaKnown RBP4.05□□□□□ -1.76
SDCBPP3-201ENST00000419629 ATXN1LP0C7T5 689 aaKnown RBP4.05□□□□□ -1.76
SDCBPP3-201ENST00000419629 EBLN1P0CF75 366 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms