RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 SUMF1Q8NBK3 374 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 RDH13Q8NBN7 331 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 ZBTB44Q8NCP5 570 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 BPIFB1Q8TDL5 484 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 SCFD1Q8WVM8 642 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 ATRIPQ8WXE1 791 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 NELL1Q92832 810 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 HPDLQ96IR7 371 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 ZFYVE19Q96K21 471 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 PKMYT1Q99640 499 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 BLZF1Q9H2G9 400 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 ABCB6Q9NP58 842 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 PRMT8Q9NR22 394 aaPredicted RBP10.12□□□□□ -0.79
NUP50-205ENST00000419387 AGPAT3Q9NRZ7 376 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 THG1LQ9NWX6 298 aaKnown RBP10.12□□□□□ -0.79
NUP50-205ENST00000419387 ZSCAN32Q9NX65 697 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 RCOR1Q9UKL0 485 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 MAGED2Q9UNF1 606 aaPredicted RBP10.12□□□□□ -0.79
NUP50-205ENST00000419387 PCDHGA2Q9Y5H1 932 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 FAM186AA6NE01 2351 aa10.12□□□□□ -0.79
NUP50-205ENST00000419387 UBE4BO95155 1302 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 PTPRJQ12913 1337 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 SLC38A8A6NNN8 435 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 SOBPA7XYQ1 873 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 SPECC1L-ADORA2AF8WAN1 911 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 HCRTO43612 131 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 PRAMEF12O95522 483 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 CST3P01034 146 aaPredicted RBP10.11□□□□□ -0.79
NUP50-205ENST00000419387 TNNI1P19237 187 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 AVPR1AP37288 418 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 AFMP43652 599 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 DNM1Q05193 864 aaKnown RBP10.11□□□□□ -0.79
NUP50-205ENST00000419387 CUL4BQ13620 913 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 PPP2R5DQ14738 602 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 SNRNP35Q16560 246 aaKnown RBP10.11□□□□□ -0.79
NUP50-205ENST00000419387 CFAP221Q4G0U5 840 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 SDHAF4Q5VUM1 108 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 TXNDC8Q6A555 127 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 FAM171BQ6P995 826 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 TSSK4Q6SA08 328 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 HS2ST1Q7LGA3 356 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 MON1AQ86VX9 555 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 RALGPS2Q86X27 583 aaPredicted RBP10.11□□□□□ -0.79
NUP50-205ENST00000419387 SPATA2LQ8IUW3 424 aaPredicted RBP10.11□□□□□ -0.79
NUP50-205ENST00000419387 XXYLT1Q8NBI6 393 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 TTC8Q8TAM2 541 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 RUBCNQ92622 972 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 MRPS31Q92665 395 aaKnown RBP10.11□□□□□ -0.79
NUP50-205ENST00000419387 FUBP3Q96I24 572 aaKnown RBP eCLIP10.11□□□□□ -0.79
NUP50-205ENST00000419387 FNBP1Q96RU3 617 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 FAM126AQ9BYI3 521 aaPredicted RBP10.11□□□□□ -0.79
NUP50-205ENST00000419387 SMG9Q9H0W8 520 aaKnown RBP10.11□□□□□ -0.79
NUP50-205ENST00000419387 SLC39A2Q9NP94 309 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 GKN1Q9NS71 199 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 GTSE1Q9NYZ3 720 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 CGNQ9P2M7 1197 aaKnown RBP10.11□□□□□ -0.79
NUP50-205ENST00000419387 UXTQ9UBK9 157 aaPredicted RBP10.11□□□□□ -0.79
NUP50-205ENST00000419387 CDH9Q9ULB4 789 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 F5P12259 2224 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 TICRRQ7Z2Z1 1910 aa10.11□□□□□ -0.79
NUP50-205ENST00000419387 COL4A2P08572 1712 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 PATJQ8NI35 1801 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.1□□□□□ -0.79
NUP50-205ENST00000419387 LILRB5O75023 590 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 ATP2C2O75185 946 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 NOL4O94818 638 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 FAM163BP0C2L3 166 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 DLATP10515 647 aaKnown RBP10.1□□□□□ -0.79
NUP50-205ENST00000419387 WARSP23381 471 aaKnown RBP10.1□□□□□ -0.79
NUP50-205ENST00000419387 LMO2P25791 158 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 CTHP32929 405 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 MAGEA11P43364 429 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 ID4P47928 161 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 CXCL12P48061 93 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 CYP2J2P51589 502 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 CCR3P51677 355 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 NRLP54845 237 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 TNK2Q07912 1038 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 CYP24A1Q07973 514 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 LRRC32Q14392 662 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 PSMD6Q15008 389 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 CCDC142Q17RM4 750 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 BMT2Q1RMZ1 405 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 ITPRIPL2Q3MIP1 535 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 DGKKQ5KSL6 1271 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 TXNDC11Q6PKC3 985 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 C4orf50Q6ZRC1 276 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 SCN4BQ8IWT1 228 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 C12orf56Q8IXR9 622 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 CEP57L1Q8IYX8 460 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 EFCAB3Q8N7B9 438 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 STKLD1Q8NE28 680 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 KBTBD7Q8WVZ9 684 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 USP13Q92995 863 aaPredicted RBP10.1□□□□□ -0.79
NUP50-205ENST00000419387 TRMT2BQ96GJ1 504 aaKnown RBP10.1□□□□□ -0.79
NUP50-205ENST00000419387 MYRFLQ96LU7 910 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 MMS19Q96T76 1030 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 CGRRF1Q99675 332 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 HINFPQ9BQA5 517 aa10.1□□□□□ -0.79
NUP50-205ENST00000419387 SYT15Q9BQS2 421 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms