RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PRPF4BQ13523 1007 aaKnown RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 BMS1Q14692 1282 aaKnown RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 KARSQ15046 597 aaKnown RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 NFKBIBQ15653 356 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 MAPK6Q16659 721 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 FAM187BQ17R55 369 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 AAK1Q2M2I8 961 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 SLC27A1Q6PCB7 646 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 BEND4Q6ZU67 534 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 ADGRD2Q7Z7M1 963 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 TMEM173Q86WV6 379 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 SYT2Q8N9I0 419 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 CNNM3Q8NE01 707 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 RASSF8Q8NHQ8 419 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 URGCPQ8TCY9 931 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 CYB5D2Q8WUJ1 264 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 MRPS27Q92552 414 aaKnown RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 PABPC5Q96DU9 382 aaKnown RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 CALML4Q96GE6 196 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 CCDC74BQ96LY2 380 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 USP28Q96RU2 1077 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 TIPINQ9BVW5 301 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 APOL6Q9BWW8 343 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 TRIM6Q9C030 488 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 ZSCAN16Q9H4T2 348 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-205ENST00000419378 PDZD7Q9H5P4 517 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 PIF1Q9H611 641 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 TLR9Q9NR96 1032 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 SPG21Q9NZD8 308 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 SIRPGQ9P1W8 387 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 LZTS1Q9Y250 596 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 HES2Q9Y543 173 aa7.6□□□□□ -1.19
HMGN1-205ENST00000419378 ARL5CA6NH57 179 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 CCDC169A6NNP5 214 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 NT5C1B-RDH14C9J2C7 533 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 ACKR2O00590 384 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 N4BP3O15049 544 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 INPPL1O15357 1258 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 NCK2O43639 380 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 UBOX5O94941 541 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 POMCP01189 267 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 GBP1P32455 592 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 GATA4P43694 442 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 NPTX2P47972 431 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 NRIP1P48552 1158 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 SLC11A1P49279 550 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 ALDH7A1P49419 539 aaKnown RBP7.59□□□□□ -1.19
HMGN1-205ENST00000419378 PEX3P56589 373 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 ERVFC1P60507 584 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 RNASELQ05823 741 aaKnown RBP7.59□□□□□ -1.19
HMGN1-205ENST00000419378 KCNMA1Q12791 1236 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 FXNQ16595 210 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 DDR2Q16832 855 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 PLPP4Q5VZY2 271 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 PAOXQ6QHF9 649 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 SEZ6L2Q6UXD5 910 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 USP49Q70CQ1 688 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 ZNF280BQ86YH2 543 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 HACE1Q8IYU2 909 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 MFSD2AQ8NA29 543 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 LRRC15Q8TF66 581 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 BCL7CQ8WUZ0 217 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-205ENST00000419378 PPP2R3CQ969Q6 453 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 TMEM169Q96HH4 297 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 PSMG3-AS1Q96PY0 264 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 GAD1Q99259 594 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 MIPEPQ99797 713 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 TCF25Q9BQ70 676 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 GBP3Q9H0R5 595 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 NRDE2Q9H7Z3 1164 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 UBN1Q9NPG3 1134 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 BLOC1S4Q9NUP1 217 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 CLDND1Q9NY35 253 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 KCND2Q9NZV8 630 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 ARHGAP28Q9P2N2 729 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 DNAJB4Q9UDY4 337 aa7.59□□□□□ -1.19
HMGN1-205ENST00000419378 PUF60Q9UHX1 559 aaKnown RBP7.59□□□□□ -1.19
HMGN1-205ENST00000419378 MORC2Q9Y6X9 1032 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-205ENST00000419378 ZMYM2Q9UBW7 1377 aa7.59□□□□□ -1.2
HMGN1-205ENST00000419378 NPHP3-ACAD11A0A0J9YXS1 232 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 B2RBV5 119 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 H3BQ06 376 aaPredicted RBP7.58□□□□□ -1.2
HMGN1-205ENST00000419378 K7ERI5 159 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 LINC01565O15544 149 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 TBX10O75333 385 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 DDHD2O94830 711 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 GALTP07902 379 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 PLS3P13797 630 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 AKAP5P24588 427 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 LTBRP36941 435 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 SCNN1GP51170 649 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 KRT17Q04695 432 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 SLC39A14Q15043 492 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 DCAF4L1Q3SXM0 396 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 LEXMQ3ZCV2 418 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 SPECC1Q5M775 1068 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 NT5DC1Q5TFE4 455 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 EEF1DP3Q658K8 133 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 EP400NLQ6ZTU2 488 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 GPBP1Q86WP2 473 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms