RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 FBXO6Q9NRD1 293 aaPredicted RBP15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 HAUS5O94927 633 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 ITGAVP06756 1048 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 GNAZP19086 355 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 RFC1P35251 1148 aaPredicted RBP15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 MCCD1P59942 119 aaPredicted RBP15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 CLDN10P78369 228 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 BLMHQ13867 455 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 DRICH1Q6PGQ1 229 aaPredicted RBP15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 RFX8Q6ZV50 586 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 PPIL6Q8IXY8 311 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 EMC1Q8N766 993 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 RDM1Q8NG50 284 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 PTPRN2Q92932 1015 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 MCUR1Q96AQ8 359 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 CGRRF1Q99675 332 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 C2CD2LO14523 706 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 PDIK1LQ8N165 341 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 VPS52Q8N1B4 723 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 NKD2Q969F2 451 aaPredicted RBP15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 GPRASP2Q96D09 838 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 TSSK1BQ9BXA7 367 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 CALN1Q9BXU9 219 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 CISHQ9NSE2 258 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 TJP2Q9UDY2 1190 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 XPO7Q9UIA9 1087 aaKnown RBP15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 GYG2O15488 501 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 LPXNO60711 386 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 RGS20O76081 388 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 CD48P09326 243 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 RPL22P35268 128 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 ORC1Q13415 861 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 PIGHQ14442 188 aaPredicted RBP15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 SLFN12LQ6IEE8 588 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 LMNTD2Q8IXW0 634 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 SLC7A3Q8WY07 619 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 FAM111AQ96PZ2 611 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 PDLIM7Q9NR12 457 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 METTL5Q9NRN9 209 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 ARL8BQ9NVJ2 186 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 NXF1Q9UBU9 619 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 VWA5AO00534 786 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 EDN1P05305 212 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 SERPINB3P29508 390 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 ARFIP2P53365 341 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 OSTNP61366 133 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 YWHAGP61981 247 aaKnown RBP eCLIP15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 TFAMQ00059 246 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 KHDC1Q4VXA5 237 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 XKR3Q5GH77 459 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 DSTYKQ6XUX3 929 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 RFX6Q8HWS3 928 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 DTX3LQ8TDB6 740 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 NSUN6Q8TEA1 469 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 ZNF526Q8TF50 670 aaPredicted RBP15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 HSPH1Q92598 858 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 MIPEPQ99797 713 aa15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 DDX56Q9NY93 547 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-203ENST00000419007 WNT10BO00744 389 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 SLC18A1P54219 525 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 TRPC3Q13507 836 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 TSNAXIP1Q2TAA8 658 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 KLHL38Q2WGJ6 581 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 DPH6Q7L8W6 267 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 UNC45BQ8IWX7 931 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 TFAP2BQ92481 460 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 PRR11Q96HE9 360 aaPredicted RBP15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 MAP3K20Q9NYL2 800 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 ZFATQ9P243 1243 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 ZNRF3Q9ULT6 936 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 TTLL13PA6NNM8 815 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 TMEM63AO94886 807 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 LDHAP00338 332 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 KRT3P12035 628 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 PCGF5Q86SE9 256 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 ZC3H18Q86VM9 953 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 CTAGE3PQ8IX95 158 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 JOSD2Q8TAC2 188 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 SLC35B2Q8TB61 432 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 SLC16A10Q8TF71 515 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 DNAJC9Q8WXX5 260 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 ZNF668Q96K58 619 aaPredicted RBP15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 BGNP21810 368 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 CPA2P48052 419 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 HIRAP54198 1017 aaPredicted RBP15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 RTP1P59025 263 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 RCN1Q15293 331 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 LRRC38Q5VT99 294 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 FAM83AQ86UY5 434 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 KCTD6Q8NC69 237 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 GMLQ99445 158 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 CADM1Q9BY67 442 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 ACSS3Q9H6R3 686 aa15.9■□□□□ 0.14
SEMA3B-203ENST00000419007 A0A0B4J269 797 aa15.89■□□□□ 0.13
SEMA3B-203ENST00000419007 CCDC22O60826 627 aa15.89■□□□□ 0.13
SEMA3B-203ENST00000419007 INHBAP08476 426 aa15.89■□□□□ 0.13
SEMA3B-203ENST00000419007 IL1R2P27930 398 aa15.89■□□□□ 0.13
SEMA3B-203ENST00000419007 CCNG1P51959 295 aa15.89■□□□□ 0.13
SEMA3B-203ENST00000419007 PTK7Q13308 1070 aa15.89■□□□□ 0.13
SEMA3B-203ENST00000419007 WASHC2DQ5SRD0 308 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms