RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 RALAP11233 206 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PECAM1P16284 738 aaPredicted RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 TNFAIP3P21580 790 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 CALB2P22676 271 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 RAD23BP54727 409 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 RPL7AP62424 266 aaKnown RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 NSUN2Q08J23 767 aaKnown RBP eCLIP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 TMEM132BQ14DG7 1078 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 LONRF1Q17RB8 773 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 BHLHA9Q7RTU4 235 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 TMEM126BQ8IUX1 230 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 THNSL1Q8IYQ7 743 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PLD5Q8N7P1 536 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 ARHGEF2Q92974 986 aaKnown RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 SLC2A11Q9BYW1 496 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 GBA2Q9HCG7 927 aaPredicted RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 SMYD2Q9NRG4 433 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 DDX56Q9NY93 547 aaKnown RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 SARDHQ9UL12 918 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PPP2R3BQ9Y5P8 575 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 E9PQ18 207 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 NFKBIEO00221 500 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 MDM4O15151 490 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 SUN1O94901 812 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 HLA-DRAP01903 254 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 MMP10P09238 476 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 IQCF3P0C7M6 154 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 TPSB2P20231 275 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 DNAJB1P25685 340 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 USP8P40818 1118 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 MAGEA4P43358 317 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PLTPP55058 493 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 ADAM17P78536 824 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 TPSAB1Q15661 275 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 FXNQ16595 210 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PTPN20Q4JDL3 420 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 ANGEL2Q5VTE6 544 aaKnown RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 ANKRD22Q5VYY1 191 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 KCTD11Q693B1 232 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 LLGL2Q6P1M3 1020 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 OLFML1Q6UWY5 402 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PPP1R21Q6ZMI0 780 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PLPPR4Q7Z2D5 763 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 CCDC89Q8N998 374 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PHC3Q8NDX5 983 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 OR5B17Q8NGF7 314 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 STK32AQ8WU08 396 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 ZNF606Q8WXB4 792 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 SIKE1Q9BRV8 207 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 CADM1Q9BY67 442 aaKnown RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 C20orf27Q9GZN8 174 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 FGFR1OP2Q9NVK5 253 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 TCRBV7S3A2A0A539 114 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 SDR42E2A6NKP2 422 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 C2CD4BA6NLJ0 364 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 APOC4-APOC2K7ER74 178 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 CILPO75339 1184 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 APOC2P02655 101 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 ERCC3P19447 782 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 ATP5DP30049 168 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 KCNJ1P48048 391 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 BPIFB4P59827 614 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 GAD2Q05329 585 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 MSLNQ13421 630 aaPredicted RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PIGHQ14442 188 aaPredicted RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 MFSD7Q6UXD7 560 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PRUNE1Q86TP1 453 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 ERICH1Q86X53 443 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 CCDC117Q8IWD4 279 aaPredicted RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 TPH2Q8IWU9 490 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 KBTBD2Q8IY47 623 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 TEX9Q8N6V9 391 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.7□□□□□ -1.663e-10■■■■■ 27
GPCPD1-202ENST00000418646 UBLCP1Q8WVY7 318 aaPredicted RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 TADA1Q96BN2 335 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 ALKBH8Q96BT7 664 aaKnown RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 STAMBPL1Q96FJ0 436 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 SORT1Q99523 831 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 SLC4A5Q9BY07 1137 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 IFT122Q9HBG6 1241 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 INTS9Q9NV88 658 aaKnown RBP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 PARVAQ9NVD7 372 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 IP6K2Q9UHH9 426 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 EXOC7Q9UPT5 735 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 COL1A2P08123 1366 aa4.7□□□□□ -1.66
GPCPD1-202ENST00000418646 SPDYE16A6NNV3 312 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 H3BNX3 289 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PPP1R12BO60237 982 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 CCNT2O60583 730 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 EGFRP00533 1210 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 CST3P01034 146 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PTPRAP18433 802 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 STIP1P31948 543 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 RPA3P35244 121 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 MATR3P43243 847 aaKnown RBP eCLIP4.69□□□□□ -1.662e-6■■■■□ 20.7
GPCPD1-202ENST00000418646 MBTD1Q05BQ5 628 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 KCTD19Q17RG1 926 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 Q3C1V9 767 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 USH1GQ495M9 461 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms